Nicotiana tomentosiformis: 104120725
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Entry
104120725 CDS
T05025
Name
(RefSeq) uncharacterized protein isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03030
DNA replication
nto03410
Base excision repair
nto03420
Nucleotide excision repair
nto03430
Mismatch repair
nto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104120725
03410 Base excision repair
104120725
03420 Nucleotide excision repair
104120725
03430 Mismatch repair
104120725
03440 Homologous recombination
104120725
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nto01009
]
104120725
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nto03032
]
104120725
03400 DNA repair and recombination proteins [BR:
nto03400
]
104120725
Protein phosphatases and associated proteins [BR:
nto01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104120725
DNA replication proteins [BR:
nto03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
104120725
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
104120725
MMR (mismatch excision repair)
DNA polymerase delta complex
104120725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
MsyB
Motif
Other DBs
NCBI-GeneID:
104120725
NCBI-ProteinID:
XP_009630843
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All DBs
Position
8:3898083..3904103
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AA seq
514 aa
AA seq
DB search
MANDMETLGILDEIQALVSDKLQVVSYKWLSRNFLVSSDSAKRLLQEFVEKQGNDFEVVY
SLSGWLKTSPSTYHIRLVSAPNLAEAKKEFSDDCSVQVYSVQACIPKDPVALWNAEFVQA
EELFRLPLSVDNCLLDNRFCGVSNPFVKRNGGGTIPSTTTVPQVKSAALGLSKSNSTALA
QPDQKKVQLPSPSASLPSSHVVDTKSESRGTSGPGQGSKLAAEKDKVAQLPAAKKAVQSD
KSSAKNGGALANMWGRVSTKPKADSVAAATSDATPNPAGNAAQICTPEGVEDRVSDDDDQ
QVSIRRTSNGEGNRKRRVIFDFSDEEDEFKDAVNLASPDPPKQKSILGSKQSPSTLELEK
QEVKKAKEAGTKNHEREREPLPTSESEKSKLSSSEMISEHASLKNATIKDEMADAAPVSP
KRRKVLKTRIDERGREVTEVVWEGEDGETNADSNTMKKADNKPVKSTGDRPPMAKKSPAL
ASTAPTRQAGKEGNKKTGNKDPKQGNILSFFKKA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgacatggaaaccctaggcatcctcgatgagattcaagctcttgtatcagac
aaacttcaagtggtttcatacaagtggctgagtcgtaattttctggtgtcatcagattct
gcaaagaggttgcttcaggaatttgtcgaaaagcagggaaatgattttgaggtggtctac
agcttgtctggctggttgaaaactagcccttcaacctaccatataagacttgtctctgct
cctaacctcgcagaagccaagaaagaattttcggacgattgctcagttcaggtctatagt
gtgcaagcttgcatcccaaaggatccagtggccctctggaatgctgaatttgtgcaggcc
gaagagctcttcaggctgcccctctcagttgataattgtttgcttgataataggttttgt
ggagtttcaaatcctttcgtcaagcgcaatggtggaggaacaattccaagcactactact
gttcctcaagtgaaaagtgcagcattaggacttagtaaaagtaactctactgccctagcg
caacctgatcagaaaaaggttcaactaccaagtcctagcgccagtttgccatcttcgcat
gtggttgataccaaaagtgagagtcgtggcacatcaggtcctggacagggtagtaagctt
gctgcagaaaaagacaaagttgctcaactgccggctgctaagaaggcagttcagtctgac
aaaagttctgctaaaaatggcggggcattggctaatatgtggggtcgtgtatccacaaag
ccaaaagccgacagtgttgcagctgctaccagtgatgccacaccaaatcctgctggtaat
gcggctcaaatatgtactccggaaggagtagaagatagggtcagcgatgatgatgatcaa
caagtcagcatcaggagaacatcaaatggtgagggaaatagaaagaggagggtaattttt
gatttttcggatgaagaagatgaattcaaggatgccgtcaacctagcatcacctgatcct
ccaaagcagaaatcgattttaggatcaaaacaaagtcctagtactctagaactggaaaag
caggaagtcaagaaggcaaaggaggctggcaccaagaatcatgaacgagaaagagaacct
ttacctaccagcgaatcggagaagtctaagttatcctcttcagagatgatttcagaacat
gccagtcttaagaatgcaactataaaggatgaaatggcagatgctgctccagtttcccct
aaaaggagaaaagtattgaagacacgaattgacgaacgtggaagagaagtgaccgaggtt
gtttgggagggtgaagatggagaaacaaatgctgacagtaatacaatgaagaaagctgac
aacaaaccagttaaaagtactggtgacagaccacccatggctaagaagtctcccgcactg
gcaagtactgcacctacgcgtcaagcaggtaaagaaggaaacaaaaaaacaggaaataag
gatcctaagcaagggaatattctatcattttttaagaaggcttag
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