Nicotiana tomentosiformis: 104121271
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Entry
104121271 CDS
T05025
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nto03036
]
104121271
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104121271
Meiosis-specific proteins
Cohesin complex and associated proteins
104121271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
AAA_23
ABC_tran
CENPH
Laminin_I
Laminin_II
FapA
Baculo_PEP_C
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
104121271
NCBI-ProteinID:
XP_009631519
LinkDB
All DBs
Position
1:complement(109456943..109482749)
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AA seq
1218 aa
AA seq
DB search
MPSQPSPGKIHRLELENFKSYKGFQTIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTG
QLRGAQLKDLIYAFDDREKEQRGRRAFVRLVYQLATGTEIQFTRTITGAGGSEYWIDGKI
VNWDEYNAKLKSLDILVKARNFLVFQGDVESVASKNPRELTNLLEQISGSEEFKRRYEEL
EEEKARAEEKKALAYQKKKTVNMERKQKKEQKEEAEKHLRLQEQLKSLKQEYFLWQLFNI
EKDVAKANEELDAEEAVVKEIVEKLGEYESASSSQKKELSGYMKEIAMYERKIADRKNKL
DKNQPEVVKLKEEMNRITSKIKNTTKDLDKKREEKRRHADEVKKLQSDLRDITKQLDEVR
QKSQEAGGKLQLADSQLETYHQIKEEAGMKTAKLRDEKEVLDRQQRADIDAEKNLEENLQ
QLENRKHELESQEKQMQTRLKKILDAVKKHDEELKRVNEEQREMKNNLRRSRDKYDNLRK
RMDEVEDQLRELKAERHETERDAKLSQAVETLKRLFPGVHGRMTDLCRPTQKKYNLAVTV
AMGRFMDAVVVENEQTGKECIKYLKEQRLPPQTFIPLQSVRVKPIIERLRTLGGTAKLAF
DVIQFDPSLEKAILFAVGNTLVCDDLTEAKHLSWSGERFKVVTVDGILLTKSGTMTGGTS
GGMEARSHKWDDKKIEGLKKKKEGLESEFEKLGSIREMQLKESEASGKISGLEKKIHYAE
IEKKSIEDKLLNLEREKGTIANEIGQIQPELEELKRNIDTRAREILLREKRINDIVDRIY
KKFSESVGVKNIREYEENQLKAVQQMAEERLNLHNQQSKLKSQLEYEQKRDMNSRIVKLE
STLGNFRKQLEEIEGKQVAQKSAMEKATEEIEGYNEAVSDLRSKAEVCEKHLQDWQKKIS
AETTSISKHNRQIRSKEAQIEQLNSRKQEILDTCELEQIPLPTISDPMDTGESMPGPVFD
FSNLSKPYQQKRKPAEREKLEVEFTQKMAALTSEIERTTPNLKALDQYKDLLKKEEDVTK
EFEVAKNEEKKVADEYNRVKEARYELFMKAFNHISGNIDKIYKQLTKSNTHPLGGTAYLN
LDNEDEPFLHGIKFTAMPPTKRFRDMEQLSGGEKTVAALALLFAIHSFRPSPFFILDEVD
AALDNLNVAKVAGFIRSKSCGGARLNQDPEEGCGFQSIVISLKDSFYDKAEALVGVYRDS
DLGCSRTLTFDLTKYRES
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgccatcccaaccgtcgccggggaaaatccaccggctagaactagaaaacttcaaatcc
tacaaagggtttcaaacaatcggtccattttacgacttcacagcaattataggcccaaat
ggagccggaaaatccaacctaatggacgctattagtttcgtcctcggcgttcgcactggt
cagctccgtggtgcacagttgaaggaccttatttatgccttcgatgaccgtgaaaaagag
cagagaggtcgaagagctttcgtgaggctagtttatcagcttgctactggtactgaaatt
cagtttactcgaactattactggtgctggtggtagtgagtattggattgatggtaaaatt
gtcaactgggacgagtataatgccaaattgaagtcccttgatattcttgttaaagcacgg
aattttctcgtctttcagggtgatgtcgagtcagttgcctctaaaaatccaagagaactt
actaatcttcttgagcaaatatctggatctgaagagtttaagagacggtatgaagaattg
gaagaagaaaaggcaagagctgaggagaagaaggcattggcttaccagaaaaagaaaact
gtaaatatggagcggaagcagaaaaaggaacagaaagaggaagctgaaaagcatcttcgg
ttacaagaacaactgaaatctttgaagcaagaatactttctatggcaattatttaacata
gaaaaggatgtcgcaaaggccaatgaggaacttgatgctgaagaagcagttgtcaaagaa
attgtggagaagctgggggaatatgaaagtgcatctagcagccagaaaaaagaactaagt
ggatatatgaaagagattgcaatgtacgaaaggaagattgctgatagaaagaacaaactt
gacaagaatcaacctgaagttgtaaagttgaaggaagagatgaatcggattacttcaaaa
ataaaaaatacgactaaagaccttgataagaagagagaagaaaaaagaagacatgcggat
gaggtgaagaaacttcagagtgacttgagggacattactaagcagcttgatgaagtgcgt
caaaaaagtcaagaagcaggtggaaaacttcagttagctgacagtcagttagagacatat
caccaaattaaagaggaggctggcatgaaaactgcaaagttaagggatgagaaggaggtt
ttagataggcagcagcgtgctgacattgatgctgagaagaatttggaagaaaatcttcag
caattggaaaatcggaagcatgagctggagtctcaggagaaacagatgcaaactaggctg
aagaaaattcttgatgcagttaagaagcatgatgaagaactgaaacgggtgaatgaagaa
cagcgtgagatgaaaaataatcttagacggtccagagacaaatatgacaatttgaggaag
cgaatggatgaagtagaagatcagcttcgtgaactgaaggctgagagacatgaaactgag
agggatgccaaattgtctcaagcagttgaaactctgaagcgtttatttcctggtgttcat
ggtcggatgactgatctctgcaggccaacacaaaagaagtataaccttgctgtaactgtt
gcaatgggcagatttatggatgcagtagtagttgagaacgaacaaacaggaaaagaatgc
atcaagtatttgaaagaacaaaggcttcctcctcagacatttatacctcttcagtcagtc
cgtgtaaagccaataatagagaggctgcgcaccttgggtggaactgcaaagctcgctttt
gatgtcatacaatttgatccctcattggagaaagctattttgtttgctgttggtaatacc
cttgtctgtgatgacctaactgaagctaagcatcttagctggagcggggaaagatttaaa
gttgtgactgttgatgggattctgttgacaaagtctggtacaatgactggtggtactagt
ggtggcatggaagcgcgttcgcataaatgggatgataaaaaaattgaagggcttaagaag
aaaaaggaaggtcttgaatcagaatttgagaagcttggatcgataagggagatgcagcta
aaggagtctgaagcatccggaaaaatcagtggacttgagaaaaagattcactatgcggaa
atcgaaaagaaaagtattgaagacaagcttctaaatttggagcgtgaaaagggtactatt
gctaatgagattggacaaatccagcctgaacttgaggagttgaaaagaaacattgatacg
agggcacgcgagatcttattacgagagaaaaggatcaatgacattgttgacagaatatat
aagaaatttagcgaatctgttggggtgaagaacatacgggagtatgaagaaaaccagctc
aaagctgttcagcaaatggctgaagaaaggcttaacttgcataaccaacagtcaaagcta
aaatctcagttggaatatgagcagaagcgggatatgaattcacgtattgtgaaactggaa
tcaactcttggtaactttaggaagcaattggaagagattgagggcaagcaggtggcccag
aagtcagccatggagaaagcaactgaagagattgagggttacaatgaagcagtgtccgat
ttgaggtctaaagctgaagtgtgcgaaaaacatctgcaggattggcagaaaaagatttct
gctgagacaacaagcatcagcaaacataaccgtcaaattaggtcaaaggaggcacagatt
gagcagctgaattcaagaaaacaagagatactggacacatgtgaattggagcagataccc
cttcccactatctctgatccaatggatactggagaatcgatgccgggccctgtttttgat
ttcagtaatctgagtaaaccttatcagcagaaaaggaaaccagctgaacgggagaagctt
gaggtggaatttacacaaaaaatggctgcgttgacgtcagagattgaaaggacaactcca
aatctgaaggcccttgatcaatataaagatctattgaagaaggaagaagatgtcacgaag
gagtttgaagtggccaaaaatgaagaaaagaaagtagctgatgagtataatagagtgaaa
gaggccaggtatgaattgtttatgaaagctttcaatcatatatctggcaatattgacaag
atatacaagcaactgacaaagagcaacactcatccccttggcgggacagcctatctcaac
ttggataatgaagatgaaccatttttacatggcattaagtttactgctatgcccccaacg
aagcgttttcgggatatggagcagctctcaggcggagagaaaactgttgcagcacttgcc
ttgcttttcgcaatccacagttttaggccttctccattctttatattggatgaagttgat
gctgcattggataatttgaatgttgctaaagttgctggatttatccgatcaaagtcatgt
ggaggagctaggcttaatcaggatcctgaggaaggatgtggcttccaaagcatcgtcatc
tctctcaaagacagcttttatgacaaagccgaagctttggttggtgtttacagggattcg
gacttgggttgctcgaggacattgacatttgatttgaccaagtatcgggaatcatga
DBGET
integrated database retrieval system
