Nicotiana tomentosiformis: 104121278
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Entry
104121278 CDS
T05025
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104121278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104121278
Spliceosome [BR:
nto03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
104121278
Complex B
104121278
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
104121278
NCBI-ProteinID:
XP_009631526
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All DBs
Position
2:complement(34540467..34546563)
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AA seq
473 aa
AA seq
DB search
MGDFNDAFMRNNPNVQARAKAQNRANVMQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPP
PEKRKCPSYTGMAQFVGNFAQPGDPEYAPPVPEVETPAQRKARIHKIRLEEGAKKAAEEL
EKYDPSSDPNVTGDPYKTLFVARLNYETTESRVKREFEAFGPIKRVRLVTDNTNNKPRGY
AFIEYVHTRDMKAAYKQADGKKIDNRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGTEDV
NREVVQIGRAASRSEEPRVRDDRERDREKSRDRVRDREREKSRERSHDRPRERDRDDKHH
RERERTRDRERDRGRDRDRDRERDRTRDRERGKDRDRERDRHRERDRERGKDYEGEVDQG
RGRSRDREYDYEHGESKHERERHGDRERNYDPAEPEDDHGHYDHYDQHKGRGDYENPDAQ
AGDDRYKDASHVDDRYDQMEEDNYAYDHGASEAKEKNRDHRRSDRSHSREYDY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgggagatttcaacgatgccttcatgcggaacaaccctaatgtccaggcccgtgcaaag
gctcagaatcgcgctaatgttatgcaactcaagctgattggtcaaagtcatccaactggg
ttgacggctaatcttctgaaactgtttgagccccgaccgcctttggagtacaaaccacct
cccgagaagagaaaatgcccttcatatacagggatggcacaatttgttggtaactttgct
cagcctggcgatccagaatatgctccaccggtccctgaggttgaaaccccggctcaacga
aaagctaggatccacaagatacggctggaggagggtgctaaaaaggctgctgaggagctt
gagaaatatgatcctagcagcgatccaaatgttactggagatccatacaagacactcttt
gttgctagacttaattatgagacaacggaaagcagagttaaacgtgaatttgaggctttt
ggtccaatcaagcgggttcgtttggttacggacaatacaaacaataaacccaggggttat
gcttttattgagtatgttcatacacgggatatgaaagctgcatataaacaagctgatgga
aagaagattgataatagaagagttctggttgatgttgaacgtgggagaacagtccccaat
tggcgtccccgaagacttggcggtggacttggaacaacaagagttggaactgaagatgtt
aatagagaggtagttcagattggaagggcggcatctcgctccgaagagccaagagtacga
gatgacagagaaagggatcgggagaagtcccgtgatagggtgcgagatagagaaagagaa
aaatctcgtgaacgttcacatgataggccaagggaacgtgacagagatgacaaacatcat
agggaacgcgagagaactagggatagagaaagagatcgtggacgagaccgcgatcgagac
cgtgaacgtgacaggacacgtgaccgcgaacggggcaaagatagggaccgtgagcgggat
cgccaccgtgagagggatagagaaagaggtaaggactatgaaggtgaggtggaccagggt
cgtgggcgttctcgtgatagagaatatgattatgagcatggtgaatcaaaacatgagcgg
gaaagacatggcgacagagaaaggaactatgatcctgcagaacctgaagatgatcatgga
cattatgaccattatgatcaacataaaggtcgaggagactatgagaatccagatgctcaa
gctggtgatgatcgctataaagatgccagtcatgttgatgatcgttatgatcaaatggag
gaggataattatgcttatgaccacggggcatctgaggcaaaagaaaagaaccgtgatcat
aggcgttcagataggtcacattctcgtgaatatgactactga
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