Nicotiana tomentosiformis: 104121410
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Entry
104121410 CDS
T05025
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00100
Steroid biosynthesis
nto00909
Sesquiterpenoid and triterpenoid biosynthesis
nto01100
Metabolic pathways
nto01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
104121410
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
104121410
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nto01006
]
104121410
Enzymes [BR:
nto01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
104121410
Prenyltransferases [BR:
nto01006
]
Terpene biosynthesis
Squalene/phytoene synthase
104121410
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
PreP_C
Motif
Other DBs
NCBI-GeneID:
104121410
NCBI-ProteinID:
XP_009631700
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Position
1:77342465..77351066
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AA seq
411 aa
AA seq
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MGSLRAILKNPDDLYPLVKLKLAARHAEKQIPPSPHWGFCYSMLHKVSRSFALVIQQLPV
ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFSCGTKEYRVLMD
QFHHVSTAFLELGKHYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL
SKLFHTSGKEDLASDSISNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL
EELKYEDNSAKAVQCLNDMVTNALSHVEDCLTYMSALRDPSIFRFCAIPQVMAIGTLAMC
YDNIEVFRGVVKMRRGLTAKVIDRTRTMADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL
DVILKTCRDSGTLNKRKSYIIRSEPNYSPVLIVVIFIILAIILAQLSGNRS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgagggcgattttgaagaatccagatgatttgtatccattggtaaagctg
aagctagcggctcgacacgcggagaagcagatcccgccgtctccacattggggcttctgt
tactcaatgcttcataaggtttctcgtagctttgccctcgtcattcaacaacttcccgtc
gagcttcgtgacgccgtgtgcattttctatttggttcttcgagcacttgacactgttgag
gatgataccagcattcccaccgatgttaaagtacctattctgatctcttttcatcagcat
gtttatgatcgcgaatggcatttttcatgtggtacaaaggagtacagggttctcatggac
cagttccatcatgtttcaactgcttttctggagcttgggaaacattatcagcaggcaatt
gaggatattaccatgaggatgggtgcaggaatggcaaaattcatttgcaaggaggtggag
acaaccgatgattatgatgaatattgtcactatgtagctgggcttgttgggctaggattg
tcaaaactgttccatacctctgggaaagaagatctggcttcagattctatctctaactcc
atgggtttatttcttcagaaaacaaacatcattagagattatttggaagacataaatgaa
gtacccaagtgccgtatgttctggccccgtgagatatggagtaaatatgttaataagctt
gaggaattaaagtacgaggataactcggcgaaggcagtgcaatgtctcaatgacatggtc
actaatgctttatcacatgtagaagattgtttgacttacatgtctgctttgcgtgatcct
tccatctttcgattctgtgctattccacaggtcatggcaattgggacattagctatgtgc
tacgacaacattgaagtcttcagaggagtggtaaaaatgagacgtggtctgactgctaag
gtcattgaccggaccaggactatggcagatgtatatggtgctttttttgacttttcttgt
atgctgaaatccaaggttaataataatgatccaaatgcaacaaaaactctgaagaggctt
gacgtgatcctgaaaacttgcagagattcgggaaccttgaacaaaaggaaatcatacata
atcaggagcgagcctaattacagtccagttctgattgtcgtcattttcatcatactggct
attattcttgcacagctatctggaaaccgatcttag
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