Nicotiana tomentosiformis: 138891378
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Entry
138891378 CDS
T05025
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
138891378
Spliceosome [BR:
nto03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
138891378
Other components
Complex C specific factors
138891378
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Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Mis12
Motif
Other DBs
NCBI-GeneID:
138891378
NCBI-ProteinID:
XP_070033839
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Position
6:118548247..118551550
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AA seq
860 aa
AA seq
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MDDHQEMERFGMENDFEDGQWIGGEFYYRKRKEKKHVQTKDDVLYGVFASDDSDSDYEGS
SKKRKKGLSTKADLTKPVNFVSTGTVMPDQEIDRNFKEEKNQKMSEESKGLGSGASVGLG
FGTSSSKNIAADEYTKTQAQVEIEEENFLPTAFGRKIKEGALRREKEREKEKSMLAKKSS
ESGRREPGGDVGGFEKHTKGIGMKLLEKMGYKGGGLGKNEQGILAPVEAKLRPKNMGMGF
NDYKETSAPTLQESEGKPVARPAQPVEGHSKEKLWSKQAKKLKKVYITAEELLAKKQEQG
LEVVQKVFDMRGPQVRVLANLENLNAEDKARENDVPMPELQHNIRLIVDLAELDIQKIDS
DLRNERETVVALQKEKEKFQAEAARQKRQLDNMEEIVSVLDRIGQESTSGTLTLDSLAAA
FADLQQQYSEEYKLCNLSSIACSYAQPLFIRVFQGWDPLQTPTHGMEVVSRWKYLLQGDD
IFTISDAASPYTQIFMEVVFPAIRISGTNTWQARDPEPMLRFLESWEKLLPPAVLQTILE
NIVLPKLSAAVDSWDPRRETIPIHSWVHPWLPLLGQRLESCYHTIRNRLESVLHAWHPSD
MSAYYILSPWKTVFDAINWEKLMVRFIVPKLLNVMHEFQINPANQNLDQFYWVRTWATAI
PIHHMLPILDIFFNKWEVVLYHWLCSKNPNFEEVTKWYLGWKVLIPPELLANEHVRYRLN
VGLDMMNQAVEGSEVAEPGLRENISYLRVLEQRQFETQKKAAAQSQSRPSVGSNSGIQMD
GTGGGDEMNLKRVIEVYAQQNDLLFQLKPGRMQDGHQIYGFGKISIIIDSLNQKVFAQVE
DRWSLVSLEQLLDLQKLKSR
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcatcaggaaatggaaaggtttgggatggagaacgattttgaagatggtcag
tggatcggtggcgagttctactaccggaagcgcaaagaaaagaagcatgttcaaaccaaa
gatgatgtcctctatggtgtttttgcttccgacgatagtgactctgactacgagggatcc
tccaagaagcggaaaaaaggcctttccacgaaggctgacctcaccaaacctgtcaacttt
gtttcaactggaactgtcatgcccgaccaagaaatagatcgcaatttcaaagaggagaag
aaccagaaaatgtccgaagagagcaaaggtttgggatctggagcatctgttggccttgga
tttggtactagttcctcgaagaatattgctgctgatgaatacaccaaaacacaggcccag
gttgaaattgaagaggaaaactttctgcccactgcttttgggaggaagattaaagaaggt
gccctaagacgtgagaaggaaagggaaaaggagaagtctatgttggccaagaaatcttct
gaatcagggagaagggaacctggtggtgatgttggtggctttgagaagcataccaagggg
attgggatgaagttgcttgagaagatgggttataagggaggtgggttgggaaaaaatgag
caaggaattttggctccggtcgaggcaaagcttaggcccaagaatatgggaatgggcttc
aacgactataaggagactagtgcaccaactcttcaagaatcagagggaaagcctgttgct
cgtcctgctcaacctgtggaaggccactcaaaagagaagctttggtcaaagcaagctaaa
aaactgaagaaggtttacattacagctgaagagttgttagccaaaaagcaggagcagggc
ctggaagttgttcagaaggtctttgatatgaggggtccacaggttcgagtcttggcgaat
ctggagaacttgaacgcggaagataaagcaagggaaaatgatgttccaatgcctgaactt
cagcataatattaggttgattgtggatttggcggaacttgacatacagaaaattgacagt
gatttaagaaatgagagagaaacagttgttgctttgcagaaggagaaggagaagtttcaa
gctgaggccgctcgccagaaaaggcagcttgataatatggaagagattgtcagtgtattg
gaccggattgggcaagagagcacatctggtactctgaccttagactcccttgcagcagca
tttgcagacttgcagcagcagtattctgaggaatacaaactctgcaacttgtcaagcata
gcatgctcatatgctcagcctttatttatacgtgtttttcaaggatgggatccacttcaa
actccaacacatggaatggaggtggtttccaggtggaagtatcttttgcaaggcgatgac
atttttactatctctgatgctgcatctccttatactcaaatattcatggaagttgttttc
cctgccattagaatatctggcaccaatacctggcaggcaagggaccctgaaccaatgctt
cgttttttggagtcctgggagaagctgttgcctcctgcagtccttcagacaatattggaa
aacattgtcttgcccaagttatcagctgctgtggactcctgggatccacgtcgagaaaca
attccaatccattcctgggttcatccatggctgcccttattgggtcaaaggttggaaagc
tgctatcacactatacgtaacagattggaaagtgtactgcatgcttggcacccaagtgat
atgtctgcatactacatattgtctccttggaagaccgtgtttgatgcaattaactgggaa
aaactgatggtcagatttattgttccaaagttgttaaatgtaatgcatgaattccaaata
aatccagcaaatcagaaccttgatcagttctattgggtccgtacttgggctactgctatt
cccatccatcacatgcttccaatactggatatattcttcaacaagtgggaagtagttttg
tatcactggttatgctcaaaaaacccgaactttgaagaagtgacaaaatggtatttgggt
tggaaggtactcattccacctgaacttctggcaaatgaacacgttcgctatcgacttaat
gtcggtctagacatgatgaaccaggctgttgaaggttcagaggtggctgaacctggtctg
agggagaacataagttatcttagggttcttgaacaaaggcagtttgagactcagaaaaaa
gcagcagcgcaatctcaatcccgtccttctgtgggctcgaacagtggaatccaaatggac
ggtacaggtggcggggatgagatgaacttgaaaagagttattgaagtttatgcacaacag
aatgatttgttgttccagcttaagcccgggcgaatgcaagatggtcatcagatatatggt
tttggtaaaatcagcattattatagattctctcaatcagaaggtatttgcacaagtagag
gacaggtggtctttggtgtcacttgagcagctgttggacctgcaaaagttaaagagccga
taa
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