Nicotiana tomentosiformis: 138903547
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Entry
138903547 CDS
T05025
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03018
RNA degradation
nto03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138903547
09123 Folding, sorting and degradation
03018 RNA degradation
138903547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
138903547
03041 Spliceosome [BR:
nto03041
]
138903547
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138903547
mRNA degradation factors
5'-3' decay
Lsm complex
138903547
Spliceosome [BR:
nto03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
138903547
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
RimP_C
SM-ATX
Motif
Other DBs
NCBI-GeneID:
138903547
NCBI-ProteinID:
XP_070047962
LinkDB
All DBs
Position
1:141001612..141009899
Genome browser
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVEGTLKGYDQLLNLVLDEAKEYLRDADDPLKT
TEQTRALGLIVCRGTAVMLVAPTDGTDEISNPFVQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcagaaaagaaactgttttagatttggcaaaatttgtcgacaagggtgtgcag
gtcaagcttacaggtggaagacaagtggaaggaacacttaaaggctatgatcagctgcta
aatcttgtcttggatgaagccaaggagtaccttagagatgctgatgatcccctgaagact
accgagcagacacgagctcttggcttaatagtctgcaggggtacagcagtaatgctagtg
gctccaactgatggtacagatgagatatccaatccatttgtccagccagatggggcatag
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