Nicotiana tomentosiformis: 138903619
Help
Entry
138903619 CDS
T05025
Name
(RefSeq) DNA mismatch repair protein MSH4-like isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nto03036
]
138903619
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Meiosis-specific proteins
Others
138903619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Motif
Other DBs
NCBI-GeneID:
138903619
NCBI-ProteinID:
XP_070048128
LinkDB
All DBs
Position
12:5967655..5980357
Genome browser
AA seq
795 aa
AA seq
DB search
MEDDTGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLQFYEPM
AIIVPPNKLAADGMVGVSQLADGFCSSTRKVIMNRGCFDDTRGAVLVKGLAAKEPSALGL
DSYYKQYYLCLAAAAATIKWIEAEKGVVVINHSLLVTFNGSFDHMNIDATSVQNLEIIEP
MHSSLLGTNSKKRSLFHMLKTTRTIGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEL
LFFGLSQALRKFPKETDRVLCHFCFKPKRVTNEVLASDNGRRNQIMISSIILLKTALDAL
PLLSQVLKEAKSCLLGNVYKSICENEKYTSIRNRIGEVIDEDVLHTRVPFVARTQQCFAL
KAGVDGLLDMARRSFCDTSEAIHDLANKYREDFRLPNLKIPFNNRKGFYFSIPQKDIQGK
LPSKFIQVMKHGNNVHCSSLELASLNARNKSAAKECWLRTAFCLEALMDAIREDVSVLTV
LSEVLCLLDMMVNSFAHTISTKPVDRYTRPNFTCDGPLAIDSGRHPILESINNEFIPNGI
FLSEASNMAIVMGPNMSGKSTYLQQVCLTVILAQIGCYIPARFATLRVVDRIFTRMGTMD
CLESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGFAIAWSCCEQLLALKAY
SIFATHMENLSELATMYPNVKILHFDVDVRNNRMDFKFLLKDGLRHVPHYGLMLAGVAGL
PSSVVETAKKITSRIKEKEMKRMEVNYRQYQDLQLTYQVAQRLMCLKFSDQDEDSLREAL
QDLKESYLSGRHKDN
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacaccggagaacgatcaagcttcgtcatcggcctcatcgagaatcgcgcc
aaggaggttggagtagctgcatttgacttgagatcagcttcactgcatctttctcagtat
atagagactagcagctcctatcaaaatacaaagactttactacagttctatgaacctatg
gcgatcattgttcccccaaataaattggcagcagatggaatggttggagtctcacagcta
gctgatggattttgttcctccacaagaaaggttataatgaatcgtggttgctttgatgat
accaggggagctgtactggttaaaggattagctgctaaggaaccgtctgctcttggtttg
gactcatactacaagcaatattatttgtgtctggctgcagcagcggcaactatcaagtgg
attgaagctgagaaaggtgttgttgtgataaatcactctttactggttaccttcaatgga
tcttttgaccacatgaacattgatgccaccagtgttcagaacttggagataattgagcct
atgcactcttctcttttgggcacaaacagcaaaaagagaagtttattccacatgcttaaa
acaactcgaactattggcgggactagacttctgagggcaaatcttttgcagcctctgaaa
gacatagagacaattaacactcgactcgattgcctggatgagttgatgagcaatgagctg
ctattctttggcttgtctcaggcccttcgtaagtttccgaaagaaacagatagggtcctt
tgtcacttctgcttcaagccaaagagagttactaatgaagtcttggcttcggataatgga
aggaggaaccaaattatgatatccagcattattcttctcaaaaccgctcttgatgcttta
ccgttactctcccaggtgcttaaagaagccaagagttgtctgcttggaaatgtttacaag
tccatatgtgagaatgaaaaatatacttcaatcaggaacagaattggagaagtgattgat
gaagatgtccttcatacacgagttccttttgttgcacggacacagcagtgttttgctctt
aaggctggagttgatgggcttcttgatatggcccgtagatcattttgtgacaccagcgaa
gctatacacgacctcgcaaataagtatcgtgaagatttcagactgccaaacttgaagatc
ccattcaataacaggaaagggttttactttagcattccgcagaaggacatacagggaaaa
ctgccgagcaagttcattcaggtcatgaaacatggaaacaatgtacattgctccagtctt
gaacttgcttcattgaatgctaggaacaagtctgcagctaaagagtgctggttgaggact
gcattctgcctggaagcattaatggatgcaatacgagaggatgtctctgtgcttaccgtt
ctttcagaagtgttgtgccttttagacatgatggtgaattcatttgctcacacgatatca
acaaaaccagttgatagatatactagacctaattttacatgtgatggcccattggcaatt
gattctggacggcaccccattctggaaagcataaacaatgaattcattccaaatggtatc
tttctttctgaagcatcaaatatggctattgtaatgggcccaaacatgagtggaaaaagt
acttatcttcagcaagtttgtctaactgtcatccttgctcaaattggttgctatattcct
gctcggtttgccactttgagagtggtcgatcgtatttttacaaggatgggaacaatggac
tgtctcgaatcaaactctagcacgttcatgacagagatgaaggagacggcttttataatg
caaaacgtctcctctagaagtctgatcgttatggatgaattggggagggcgacttcgtcc
tctgatggatttgcaatcgcatggagttgttgtgagcagctattggcacttaaagcgtac
tcaatatttgctactcatatggaaaatctttcagagctagccaccatgtatccgaatgtg
aaaattcttcattttgatgttgatgtgaggaataaccgcatggacttcaagtttctattg
aaggatggactgcgtcacgtgccacattacggccttatgttagcaggggtggctggacta
ccaagttcagtagtagaaactgccaaaaaaatcacatctaggattaaagagaaggaaatg
aagagaatggaggtgaattacagacagtatcaggacttacaattgacttaccaagtggct
caacggctgatgtgcttgaaattttcggatcaggatgaagattctttgagggaggctctg
caggatctcaaagaaagctacttaagtggtaggcataaagataattag
DBGET
integrated database retrieval system
