Nicotiana tomentosiformis: 3776300
Help
Entry
3776300 CDS
T05025
Symbol
rpoA, NitoCp065
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
3776300 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
3776300 (rpoA)
03400 DNA repair and recombination proteins [BR:
nto03400
]
3776300 (rpoA)
Enzymes [BR:
nto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
3776300 (rpoA)
Transcription machinery [BR:
nto03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
3776300 (rpoA)
DNA repair and recombination proteins [BR:
nto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
3776300 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
3776300
NCBI-ProteinID:
YP_398896
UniProt:
Q33C00
LinkDB
All DBs
Position
Pltd:complement(80210..81223)
Genome browser
AA seq
337 aa
AA seq
DB search
MVREKVTVSTRTLKWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRVKSEKVPHEYSTIMGIQESVHEILMNLKEIVLRSNLYGTSDASICVKGPGYVTAQD
IILPPYVEIVDNTQHIASLTETIDFCIGLQIKRNRGYLIKTPHNFQDGSYPIDAVFMPVR
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHIEEDNLYLQ
DNQHTVPLSPFTFHDKLAKLIKNKKKIALKSIFIDQSELPSRIYNCLKMSNIYTLLDLLN
NSQEDLMKIEHFRSEDVKQILGILEKYFVIDLAKNEF
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaagtaacagtatctactcggacactaaagtggaagtgtgttgaatca
agaacagacagtaaacgcctttattatggacgctttattctgtctccacttatgaaaggc
caagccgacacaataggcattgcgatgcgaagagctttacttggagaaatagaaggaaca
tgtatcacacgtgtaaaatctgagaaagtcccacatgagtattctaccataatgggcatt
caagaatcggtacatgaaattttaatgaatttgaaagaaattgtattaagaagtaatcta
tatggaacttctgacgcgtctatttgtgtcaagggtcctggatatgtaactgctcaagat
atcatcttgccgccttatgtagaaatcgttgataatacacaacatatagccagtttaacg
gaaacaattgatttttgtattggattacaaataaagagaaatcgtggatatcttataaaa
acgccacataactttcaagatggaagttatcctatagatgctgtattcatgcctgttcga
aacgcgaatcatagtattcattcttatgggaatgggaatgaaaaacaagagatacttttt
ctcgaaatatggacaaacggaagtttaactccgaaagaagcacttcatgaagcatcccga
aatttaattgatttatttattccctttttacatatagaggaagacaacttatatttacag
gacaatcaacacacggttcctttatccccttttacctttcatgataaattggctaaactc
ataaaaaacaaaaaaaaaatagcattgaaatcgatttttattgaccaatcagaattgcct
tccaggatctataattgcctcaaaatgtccaatatatatacattgttggaccttttgaat
aacagccaagaagatcttatgaaaattgaacattttcgtagcgaagatgtaaaacagata
ttgggcattttagaaaaatatttcgtaattgatttagcaaaaaatgagttttaa
DBGET
integrated database retrieval system
