Nocardia terpenica: CRH09_00025
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Entry
CRH09_00025 CDS
T05168
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ntp
Nocardia terpenica
Brite
KEGG Orthology (KO) [BR:
ntp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ntp03032
]
CRH09_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
ntp03400
]
CRH09_00025 (gyrB)
Enzymes [BR:
ntp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CRH09_00025 (gyrB)
DNA replication proteins [BR:
ntp03032
]
Prokaryotic type
DNA Topoisomerases
CRH09_00025 (gyrB)
DNA repair and recombination proteins [BR:
ntp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CRH09_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ATL64863
UniProt:
A0A291RBX3
LinkDB
All DBs
Position
6183..8228
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AA seq
681 aa
AA seq
DB search
MAANDSNASGTTRAKAGNQDYGASNITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVD
NSVDEAMAGFASRVDVTLLADGGVEVVDDGRGIPVEMHSQGIPTIEVVMTQLHAGGKFDS
DAYAVSGGLHGVGISVVNALSTTLQVEIDRDGHHWTQEYKDAKPGKLVQGDPTRRTGTTV
RFWADPDIFETTDYNFETVARRLQEMAFLNKGLTITLTDQRVTDSEITDEVVSETAEAPK
QAEGVAAGEHKVKTRTYLYPGGLEDFVKHINRSKQPIHNSVVSFTGKGSGHELEVAMQWN
SGYSESVHTFANTINTHEGGTHEEGFRAALTSVVNKYAKDKKLLKDKDGNLTGDDIREGL
AAIVSVKVADPQFEGQTKTKLGNTEVKSFVQRTCNEHLAHWFEANPADAKTIVQKAVSSA
QARVAARKARELVRRKSATDLGGLPGKLADCRAKDPRLSEIYIVEGDSAGGSAKSGRDSM
YQAILPIRGKIINVEKARIDRVLKNNEVQSIITAFGTGIHDEFDIAKLRYHKIILMADAD
VDGQHITTLLLTLLFRFMRPLVEHGHVYLSCPPLYKLKWQRSDPEFAYSDRERDALLEQG
QAAGKKINKDDGVQRYKGLGEMNPKELWETTMDPETRLLRLVTLDDAAAADELFSILMGE
DVEARRSFITRNAKDVRFLDL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
gtggctgccaacgactccaacgcaagcggcacgaccagggcgaaagcgggcaaccaggac
tacggtgcctccaatatcacggttctcgaggggctcgaggcggtccgcaagcgtcccggt
atgtacatcggctccaccggtgagcgcggtctgcaccatctgatctgggaggttgtggac
aactccgtcgacgaggcgatggcgggcttcgcctcgcgggtcgatgtcaccctgctggcc
gacggcggcgtcgaggtcgtcgacgacggccgcggtatcccggtcgagatgcactcccag
ggcattccgacgatcgaggtcgtcatgacccagctgcacgccggtggcaagttcgactcc
gacgcctacgcggtgtcgggcggtctgcacggcgtcggcatctccgtggtgaacgcgctg
tccaccacgctgcaggtggagatcgaccgcgacggccaccactggacccaggagtacaag
gacgccaagcccggcaagctggtgcaaggcgacccgacccggcgcaccggcaccaccgtc
cggttctgggcggacccggacatcttcgagaccaccgactacaacttcgagacggtcgcg
cggcggctgcaggagatggcgttcctcaacaagggactcaccatcacgctcaccgatcag
cgggtgaccgactccgagatcaccgacgaggtggtcagcgagaccgccgaggcgcccaag
caggccgagggcgtcgccgcgggcgagcacaaggtcaagacccggacctacctctacccg
ggcggtctcgaggatttcgtcaagcacatcaaccggtccaagcagcccatccacaactcg
gtggtgtcgttcaccggcaagggctccggccacgagctcgaggtcgcgatgcagtggaac
tcgggttactccgagtccgtgcacaccttcgccaacaccatcaacacccatgagggcggc
acccacgaggaggggttccgggcggccctgacgtcggtggtcaacaagtacgccaaggac
aagaagctgctcaaggacaaggacggcaacctcaccggcgacgacatccgcgagggtctg
gccgccatcgtcagcgtgaaggtcgccgatccgcagttcgagggccagaccaagaccaag
ctcggcaataccgaggtcaagtcgttcgtgcagcgcacctgcaacgagcacctggcgcac
tggttcgaggccaatccggccgatgcgaaaaccattgtgcagaaggccgtctcgtcggcg
caggcgcgcgtcgcggcgcgcaaggcgcgagagctggtgcgccgcaagagcgcgacggat
ctgggtggcctgcccggcaagctggccgactgccgtgccaaggatccgcgcctgtcggag
atctacatcgtggagggcgactccgccggtggctcggccaaatccggccgcgactccatg
taccaggccatcctccccatccgcggcaaaatcatcaacgtcgagaaggcccgcatcgac
cgcgtcctcaaaaacaacgaggtccaatccatcatcaccgccttcggcaccggcatccac
gacgaattcgacatcgccaaactccgctaccacaagatcatcctcatggccgacgccgac
gtcgacggccagcacatcaccaccctgctgttgaccctgctgttccggttcatgcgcccc
ctggtcgaacacggccacgtctacctgtcctgccccccgctctacaaactcaaatggcag
cgcagcgaccccgaattcgcctactccgaccgcgaacgcgacgccctgctcgaacagggc
caagccgccggcaagaagatcaacaaagacgacggcgtgcaacgctacaaaggcctcggc
gaaatgaaccccaaagaactctgggaaaccaccatggaccccgagacccgcctgctgcgc
ctggtcaccctcgacgacgcggccgccgccgacgaactgttcagcatcctcatgggcgaa
gacgtcgaagcccgccgcagcttcatcacccgcaacgccaaagacgtccgcttcctcgac
ctgtag
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