Nocardia terpenica: CRH09_02395
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Entry
CRH09_02395 CDS
T05168
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ntp
Nocardia terpenica
Pathway
ntp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ntp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRH09_02395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ntp03021
]
CRH09_02395
03019 Messenger RNA biogenesis [BR:
ntp03019
]
CRH09_02395
Transcription machinery [BR:
ntp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CRH09_02395
Messenger RNA biogenesis [BR:
ntp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CRH09_02395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATL65247
UniProt:
A0A291RD40
LinkDB
All DBs
Position
complement(515026..516183)
Genome browser
AA seq
385 aa
AA seq
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MNTTTLAPDRAPDTAPAERTVTGILDITDNRATLRVDGYLPSPDDVHVPIRLVHDTGLRR
GDAVTGIAGTKRDSAKFAPLLRIDTVNGLAPEQAKARPHFGDLVPLYPNDRLRTETEPHE
MITRITDLVMPIGKGQRALIVAPPKAGKTVALQALAHGIAKNHPECQLMLVLVGERPEEV
TDLARAVPADIAAATFDQLPQQQIALAELAIEHAKRLAETGRDVVVLLDSLTRLARAYNS
AAPASGRILSGGVDAASLAHPKRFLGAARNFENGGSLTIIATVLVETGSLADTVIFEEYK
STGNAELKLDRQIAERRVYPAVDIAQSSTRREELLLTPGELAATRAARHTLAGREPQQAL
DLLLTGLRQAGTNAEFLDRIPATRD
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaccacactcgcacccgaccgggcgccggatacggcaccggccgagcggacc
gtcaccggcatcctcgacatcaccgacaaccgcgcgaccctgcgggtcgacggatatctg
ccgagcccggacgacgtccacgtgccgatccgcctggtccacgacaccgggctgcgccgc
ggcgacgcggtcaccggcatcgccggaaccaagcgcgacagcgccaaattcgcgccgctg
ctgcgcatcgacaccgtcaacggcctggctcccgaacaggcgaaggcgcgcccgcacttc
ggcgacctggtcccgctctatccgaacgaccggctgcgcaccgaaaccgaaccgcacgaa
atgatcacgcgcatcaccgatttggtgatgcccatcggcaagggccagcgcgcgctcatc
gtggccccgcccaaggcgggcaaaaccgttgcgctgcaagcgctcgcgcacggcatcgcc
aagaaccaccccgaatgccagctgatgctggtgctggtgggcgagcgccccgaggaggtc
accgacctcgcccgcgcggtgcccgccgatatcgccgccgccaccttcgaccagctgccg
cagcagcagatcgccctcgccgagctggccatcgaacacgccaaacgcctggccgagacg
ggtcgcgacgtggtcgtgctgctggactcgctgacccggctcgcccgcgcctacaactcc
gccgcacccgcctccgggcgcatcctgtccggcggcgtggacgccgcctccctggcccac
ccgaaacggttcctgggcgccgcccgcaacttcgagaacggcggctcgctcaccatcatc
gccaccgtcctggtggagaccggctcgctcgccgacaccgtgatcttcgaggagtacaag
agcaccggcaacgccgaactgaagctggaccggcagatcgccgagcgccgcgtctacccc
gccgtcgacatcgcccaatccagcacccggcgcgaagaactgctgctcacccccggcgag
ctcgccgcaacccgtgccgcacgtcacaccctcgccggacgcgaaccgcagcaggcgctc
gacctgctgctgaccggcctgcgccaggccggaaccaatgccgaattcctggatcggatc
ccggccacccgcgactga
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