KEGG   Nocardia terpenica: CRH09_13475
Entry
CRH09_13475       CDS       T05168                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
ntp  Nocardia terpenica
Pathway
ntp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ntp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CRH09_13475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ntp03400]
    CRH09_13475
DNA repair and recombination proteins [BR:ntp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CRH09_13475
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CRH09_13475
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran AAA_29 SMC_N AAA_21 AAA_16 RsgA_GTPase AAA_25 AAA_23 ScfRs DnaJ_CXXCXGXG NACHT Viral_helicase1 ExoX-like_C
Other DBs
NCBI-ProteinID: ATL67060
UniProt: A0A291RIB0
LinkDB
Position
3043501..3046434
AA seq 977 aa
MADRLTVRGAREHNLKGVDIDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH
CPVCGEHIAKQTPQQIVDQVLAMEEGTKFQVLAPVVRTRKGEFVDLFDQLNTQGYSRVRV
DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKPSSKQRLTDSIETALRLADGIVVLDFVDR
DEHAHDRERRFSEKLACPNAHPLDIEDLEPRSFSFNSPYGACPDCTGLGIRKEVDPDLVV
PDPELSLNEGAIAPWSRGQTAEYFTRLLQGLADSIGFSMDTAWNKLPLKARKAVLEGSSD
QVHVSYTNRYGRKRSYYADFEGVMPFLQRRLENTESEQMKEHYDGYMRDIPCPVCNGARL
RPEILAVTLNAEGGRRSIAEVCEFSIRECSKFLHSLELGEREAAIAGQVLKEIQARLGFL
LDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIET
LTRLRDLGNTLIVVEHDEDTIHSSDWVVDIGPLAGEHGGQVVYSGPYKGLLADANSLTGA
YLSGRERIEVPLVRRPVNKKKQLTVVGASEHNLRGIDVSFPLGVLTSVTGVSGSGKSTLV
NDILATVLANRLNGARQVPGRHTRINGLDHLDKLVQVDQSPIGRTPRSNPATYTGVFDKI
RTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCHGARY
NRETLEVHYKGKTIAEVLDMPIEEAAEFFEPVTSIHRYLKTLVDVGLGYVRLGQSAPTLS
GGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLGVINGLVDKGNTVIVIEHN
LDVIKTSDWIIDMGPEGGSGGGTVIAEGAPEDIAAVPESYTGQFLREALAAAANAPAAPK
KATAKKTATRRKAAAVG
NT seq 2934 nt   +upstreamnt  +downstreamnt
gtggcggatcgcctgacggtgcgtggagcgcgggagcacaacctcaagggggtcgatatc
gacctaccgcgcgacagcctcatcgtgttcaccgggctgtccgggtccggtaagtccagt
ctcgccttcgacaccatcttcgcggagggccagcgccgctacgtcgagtcgctgtcggcg
tacgcgcgccaattcctcggccagatggacaaacccgatgtcgacttcatcgagggcctg
tcgcccgcggtctccatcgaccagaagtccaccaaccgcaacccgcgctcgaccgtcggc
accatcaccgaggtctacgactatctgcgcctgctgtacgcccgcgcgggtaccccgcac
tgcccggtctgcggcgagcacatcgccaagcagaccccgcagcagatcgtcgaccaggtg
ctcgccatggaggagggcaccaagttccaggtgctggcgcccgtggtgcgcacccgcaag
ggcgaattcgtcgacctgttcgaccagttgaacacccagggctattcgcgcgtacgggtc
gacggcgtggtgcaccccctcaccgacccgccgaagctgaagaagcaggagaagcacgac
atcgaggtggtcgtcgaccgcctcaccgtgaagccgagttccaaacagcgcctgaccgat
tcgatcgagaccgcgctgcgcctggccgacggcatcgtggtactcgacttcgtcgaccgc
gacgagcacgcgcacgaccgcgagcgccgcttctccgagaaactggcctgccccaacgcc
cacccgctcgacatcgaagacctcgagccgcgctcgttctcgttcaactcgccctacggc
gcctgcccggactgcaccggcctcggcatccgcaaggaggtcgaccccgacctggtggtg
cccgacccggagctgagcctgaacgagggcgccatcgcgccgtggtcgcgcggccagacc
gccgaatacttcacccgcctgctgcagggcctggccgactcgatcggcttctccatggac
acggcgtggaacaagttgccgctcaaggcccgcaaggcggtgctggagggcagctccgat
caggtgcacgtctcctacaccaaccgctacgggcgcaagcgctcctactacgccgatttc
gagggcgtcatgcccttcctgcagcggcgcctggagaacaccgagtccgagcagatgaag
gagcactacgacgggtacatgcgcgacatcccgtgcccagtgtgcaacggcgcgcgacta
cgcccggagatcctggccgtcacgctgaacgcggaaggcggccgccggtccatcgcggag
gtctgcgaattctccatccgcgaatgctcgaaattcctgcactcgctggaactgggggag
cgggaggcggcgatcgcgggccaggtgctcaaggagattcaggcgcggctgggcttcctg
ctcgatgtcggcctggagtacctgagcctgtcgcgggcggcggccacgctgtccggcggt
gaggcacagcgcatccggctcgcgacccagatcggctcgggcctggtcggtgtgctctac
gtgctggacgagccgtccatcggcctgcaccagcgcgacaatcgccgcctcatcgaaacc
ctcacccgcctgcgcgatctcggtaatacgctgatcgtggtcgagcacgacgaggacacc
atccactcctcggactgggtggtcgacatcggccccctcgccggtgagcacggcggccag
gtcgtctacagcggcccgtacaagggtctgctggccgacgcgaattccctgacgggtgcg
tacctttcgggtcgcgagcgcatcgaggtgccgctggtgcggcgtccggtgaacaagaag
aagcagctcaccgtcgtcggcgccagcgagcacaatctgcgcggcatcgacgtgagtttc
ccgctgggcgtgctgacctcggtcaccggcgtgtccggctctggcaagtccaccctggtg
aacgacatcctggccaccgtgctggcgaaccggctcaacggcgcccggcaggtgcccggc
cgtcacacccgcatcaacggcctcgaccatctggacaagctggtgcaggtcgaccagtcg
ccgatcggccgcacgccgcgctcgaacccggccacctacaccggcgtcttcgacaaaatc
cgcaccctgttcgccgcgaccaccgaggccaaggtgcgcggctatcagccgggccggttc
tcgttcaatgtgaaaggtggccgctgcgaggcgtgttcgggcgacggcacgctgaagatc
gagatgaacttcctgcccgacgtgtacgtcccgtgcgaggtgtgccacggcgcccgctac
aaccgcgagacgctcgaggtgcactacaagggcaagaccatcgccgaggtgctggacatg
cccatcgaggaggccgccgaattcttcgagccggtcacctcgatccaccgctacctgaag
acgctggtcgacgtcgggctggggtatgtgcggctcggccagagcgcgccgacgctgtcc
ggtggtgaggcgcagcgcgtcaagctcgccgccgaactgcagaagcggtccaccggccgc
accgtctacatcctcgacgagccgaccaccggcctgcacttcgaagacatccgcaagctg
ctcggcgtcatcaacggcctggtcgacaagggcaatacggtcatcgtcatcgagcacaac
ctggacgtgatcaagacctccgactggatcatcgatatgggtccggagggcggctccggc
ggcggcacggtcattgccgagggcgcgccggaagacattgcggccgtgccggaaagctac
accggccagttcctgcgcgaggcgctggccgcggcggcgaacgccccggccgcgccgaag
aaggcgacggccaagaagaccgccacgcgccgcaaggccgccgcggtcggctga

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