Nocardia terpenica: CRH09_13475
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Entry
CRH09_13475 CDS
T05168
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ntp
Nocardia terpenica
Pathway
ntp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ntp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CRH09_13475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntp03400
]
CRH09_13475
DNA repair and recombination proteins [BR:
ntp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CRH09_13475
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CRH09_13475
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
AAA_29
SMC_N
AAA_21
AAA_16
RsgA_GTPase
AAA_25
AAA_23
ScfRs
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
ATL67060
UniProt:
A0A291RIB0
LinkDB
All DBs
Position
3043501..3046434
Genome browser
AA seq
977 aa
AA seq
DB search
MADRLTVRGAREHNLKGVDIDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH
CPVCGEHIAKQTPQQIVDQVLAMEEGTKFQVLAPVVRTRKGEFVDLFDQLNTQGYSRVRV
DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKPSSKQRLTDSIETALRLADGIVVLDFVDR
DEHAHDRERRFSEKLACPNAHPLDIEDLEPRSFSFNSPYGACPDCTGLGIRKEVDPDLVV
PDPELSLNEGAIAPWSRGQTAEYFTRLLQGLADSIGFSMDTAWNKLPLKARKAVLEGSSD
QVHVSYTNRYGRKRSYYADFEGVMPFLQRRLENTESEQMKEHYDGYMRDIPCPVCNGARL
RPEILAVTLNAEGGRRSIAEVCEFSIRECSKFLHSLELGEREAAIAGQVLKEIQARLGFL
LDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIET
LTRLRDLGNTLIVVEHDEDTIHSSDWVVDIGPLAGEHGGQVVYSGPYKGLLADANSLTGA
YLSGRERIEVPLVRRPVNKKKQLTVVGASEHNLRGIDVSFPLGVLTSVTGVSGSGKSTLV
NDILATVLANRLNGARQVPGRHTRINGLDHLDKLVQVDQSPIGRTPRSNPATYTGVFDKI
RTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCHGARY
NRETLEVHYKGKTIAEVLDMPIEEAAEFFEPVTSIHRYLKTLVDVGLGYVRLGQSAPTLS
GGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLGVINGLVDKGNTVIVIEHN
LDVIKTSDWIIDMGPEGGSGGGTVIAEGAPEDIAAVPESYTGQFLREALAAAANAPAAPK
KATAKKTATRRKAAAVG
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
gtggcggatcgcctgacggtgcgtggagcgcgggagcacaacctcaagggggtcgatatc
gacctaccgcgcgacagcctcatcgtgttcaccgggctgtccgggtccggtaagtccagt
ctcgccttcgacaccatcttcgcggagggccagcgccgctacgtcgagtcgctgtcggcg
tacgcgcgccaattcctcggccagatggacaaacccgatgtcgacttcatcgagggcctg
tcgcccgcggtctccatcgaccagaagtccaccaaccgcaacccgcgctcgaccgtcggc
accatcaccgaggtctacgactatctgcgcctgctgtacgcccgcgcgggtaccccgcac
tgcccggtctgcggcgagcacatcgccaagcagaccccgcagcagatcgtcgaccaggtg
ctcgccatggaggagggcaccaagttccaggtgctggcgcccgtggtgcgcacccgcaag
ggcgaattcgtcgacctgttcgaccagttgaacacccagggctattcgcgcgtacgggtc
gacggcgtggtgcaccccctcaccgacccgccgaagctgaagaagcaggagaagcacgac
atcgaggtggtcgtcgaccgcctcaccgtgaagccgagttccaaacagcgcctgaccgat
tcgatcgagaccgcgctgcgcctggccgacggcatcgtggtactcgacttcgtcgaccgc
gacgagcacgcgcacgaccgcgagcgccgcttctccgagaaactggcctgccccaacgcc
cacccgctcgacatcgaagacctcgagccgcgctcgttctcgttcaactcgccctacggc
gcctgcccggactgcaccggcctcggcatccgcaaggaggtcgaccccgacctggtggtg
cccgacccggagctgagcctgaacgagggcgccatcgcgccgtggtcgcgcggccagacc
gccgaatacttcacccgcctgctgcagggcctggccgactcgatcggcttctccatggac
acggcgtggaacaagttgccgctcaaggcccgcaaggcggtgctggagggcagctccgat
caggtgcacgtctcctacaccaaccgctacgggcgcaagcgctcctactacgccgatttc
gagggcgtcatgcccttcctgcagcggcgcctggagaacaccgagtccgagcagatgaag
gagcactacgacgggtacatgcgcgacatcccgtgcccagtgtgcaacggcgcgcgacta
cgcccggagatcctggccgtcacgctgaacgcggaaggcggccgccggtccatcgcggag
gtctgcgaattctccatccgcgaatgctcgaaattcctgcactcgctggaactgggggag
cgggaggcggcgatcgcgggccaggtgctcaaggagattcaggcgcggctgggcttcctg
ctcgatgtcggcctggagtacctgagcctgtcgcgggcggcggccacgctgtccggcggt
gaggcacagcgcatccggctcgcgacccagatcggctcgggcctggtcggtgtgctctac
gtgctggacgagccgtccatcggcctgcaccagcgcgacaatcgccgcctcatcgaaacc
ctcacccgcctgcgcgatctcggtaatacgctgatcgtggtcgagcacgacgaggacacc
atccactcctcggactgggtggtcgacatcggccccctcgccggtgagcacggcggccag
gtcgtctacagcggcccgtacaagggtctgctggccgacgcgaattccctgacgggtgcg
tacctttcgggtcgcgagcgcatcgaggtgccgctggtgcggcgtccggtgaacaagaag
aagcagctcaccgtcgtcggcgccagcgagcacaatctgcgcggcatcgacgtgagtttc
ccgctgggcgtgctgacctcggtcaccggcgtgtccggctctggcaagtccaccctggtg
aacgacatcctggccaccgtgctggcgaaccggctcaacggcgcccggcaggtgcccggc
cgtcacacccgcatcaacggcctcgaccatctggacaagctggtgcaggtcgaccagtcg
ccgatcggccgcacgccgcgctcgaacccggccacctacaccggcgtcttcgacaaaatc
cgcaccctgttcgccgcgaccaccgaggccaaggtgcgcggctatcagccgggccggttc
tcgttcaatgtgaaaggtggccgctgcgaggcgtgttcgggcgacggcacgctgaagatc
gagatgaacttcctgcccgacgtgtacgtcccgtgcgaggtgtgccacggcgcccgctac
aaccgcgagacgctcgaggtgcactacaagggcaagaccatcgccgaggtgctggacatg
cccatcgaggaggccgccgaattcttcgagccggtcacctcgatccaccgctacctgaag
acgctggtcgacgtcgggctggggtatgtgcggctcggccagagcgcgccgacgctgtcc
ggtggtgaggcgcagcgcgtcaagctcgccgccgaactgcagaagcggtccaccggccgc
accgtctacatcctcgacgagccgaccaccggcctgcacttcgaagacatccgcaagctg
ctcggcgtcatcaacggcctggtcgacaagggcaatacggtcatcgtcatcgagcacaac
ctggacgtgatcaagacctccgactggatcatcgatatgggtccggagggcggctccggc
ggcggcacggtcattgccgagggcgcgccggaagacattgcggccgtgccggaaagctac
accggccagttcctgcgcgaggcgctggccgcggcggcgaacgccccggccgcgccgaag
aaggcgacggccaagaagaccgccacgcgccgcaaggccgccgcggtcggctga
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