Nocardia terpenica: CRH09_16250
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Entry
CRH09_16250 CDS
T05168
Name
(GenBank) B/F/G family RNA polymerase sigma-70 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ntp
Nocardia terpenica
Brite
KEGG Orthology (KO) [BR:
ntp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ntp03021
]
CRH09_16250
Transcription machinery [BR:
ntp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CRH09_16250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
KORA
HTH_3
MarR_2
HTH_Tnp_4
DUF7343
HTH_28
HTH_Crp_2
GerE
wHTH-PRTase_assc
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ATL67520
UniProt:
A0A291RJQ0
LinkDB
All DBs
Position
3649549..3650343
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AA seq
264 aa
AA seq
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MADDRGQRRPARDSYDHIETVFAELAALGPTDPRREAVREKVIALCMPLADHIARRFSGR
GEGFEDLRQVARVGLVQAVDRFDVTRGCTFLSFAVPTIMGEVRRHFRDNTWAVRVPRRTK
EIQISLGAVVETLTQRLGRMPKASEIAAELGVDLVEVTHALIAGNAYQVSSLDAVTTDDG
ENTPLSLLEVLGADEPRYALVEEFLAVRPLIAELPERERTVLLMRFFEARTQSQIAAALG
ISQMQVSRILSRTLSWLRAEALRE
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaccgcggacagcgccggcccgcccgtgacagctacgaccatatcgagacg
gtcttcgccgaactggccgcgctcggccccaccgacccgcggcgagaagcggtgcgggag
aaggtgatcgcgctgtgcatgccgctggccgaccatatcgcccgcagattctccggccgc
ggcgagggtttcgaggacctgcggcaggtggcgcgggtgggcctggtgcaggcggtggac
cggttcgatgtgacgcgcggctgcacgttcctgtccttcgccgtgcccaccatcatgggc
gaggtgcgcaggcacttccgcgacaacacctgggcggtgcgagtcccgcggcgcaccaag
gagattcagatctcgctgggcgccgtcgtcgaaaccctcacgcagcggctgggccggatg
ccgaaggccagcgagatcgccgccgagctcggcgtggacctggtggaggtcacccacgcg
ctcatcgcgggcaacgcctaccaggtgtcgtcgctggacgcggtcaccaccgacgacggc
gagaacaccccgctgtcgctgctggaggtgctgggcgccgacgaaccccgctatgccctg
gtcgaggagttcctggcggtgagaccgctcatcgccgagctgcccgagcgcgagcgcacc
gtgctgctcatgcgtttcttcgaggcgcggacccaatcccagatcgccgcggcgctgggc
atctcgcagatgcaagtctcccgcatcctgtccaggacgctgagctggctgcgcgcggag
gcgctgcgggagtga
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