Nocardia terpenica: CRH09_23890
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Entry
CRH09_23890 CDS
T05168
Symbol
hpnD
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
ntp
Nocardia terpenica
Pathway
ntp00906
Carotenoid biosynthesis
ntp01100
Metabolic pathways
ntp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ntp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
CRH09_23890 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ntp01006
]
CRH09_23890 (hpnD)
Enzymes [BR:
ntp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
CRH09_23890 (hpnD)
Prenyltransferases [BR:
ntp01006
]
Terpene biosynthesis
Squalene/phytoene synthase
CRH09_23890 (hpnD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
MdcG_N
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ATL68777
UniProt:
A0A291RN26
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All DBs
Position
5434778..5435773
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AA seq
331 aa
AA seq
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MNNITVRDAYVACEEITRTAAKNFYYGIRLLPPDKRAALCALYAMARRIDDIGDGDLAPS
AKTEALAAVRKSLHDPDTTDDPVRTALADAARRYPVPLSAFDELIDGVQMDLDGVDYQDF
AELTGYCRCVAGTVGRLCLSVFGAGADPRAPLFADQLGIALQQTNILRDIREDLMNGRVY
LPRADLDRFGVELKLDAGGALHDPDGRLAALIRHAAERAENWYCLGLRLIPELDSRSAAC
CAAMAGIYRQLNARIRANPVAVYDRRVSLSGWAKTGVASGALLRSSAAVADPAALRRLPA
GVRRSVAALTSAALLLKPSAGRSRPARVREP
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacatcaccgtgcgcgacgcctacgtcgcctgcgaggagatcacgcgcaccgcg
gcgaagaacttctactacggcatccggctgctgccccccgacaagcgggcggcgctgtgc
gcgctgtacgcgatggcccggcggatcgacgatatcggcgacggcgacctggcgccgagc
gccaagaccgaagcgcttgcggcggtgcgcaagtcgctgcacgaccccgataccaccgac
gacccggtccgcacggcgctggccgacgccgcgcgccgctacccggtgccgctctcggcg
ttcgacgagctgatcgacggcgtgcagatggatctcgacggcgtcgattatcaggatttc
gccgaactcaccggctactgccggtgtgtcgcgggcacggtcgggcggctgtgcctgtcg
gtgttcggcgccggtgccgatccgcgggccccgctgttcgccgaccagctcggaatcgcg
ttgcagcagaccaatattctgcgcgacatccgggaggacctgatgaacggccgggtgtat
ctgccgcgcgccgatctggaccggttcggggtcgagctgaagctcgatgccggtggggcg
ctgcacgatccggacgggcggctggccgcgctgatccgccatgccgccgagcgggccgag
aactggtattgcctggggctgcggctcattccggaactggactcccgcagcgccgcgtgc
tgcgcggccatggcgggcatctatcggcagttgaacgcgcgcatccgggcgaatccggtg
gccgtgtacgaccggcgggtgtcgctgtccgggtgggccaagaccggcgtggcttccggt
gcgctgctgcggagttcggcggcggtggccgatccggcggcgctgcgccgactcccggcg
ggcgtgcggcgctcggtggcggcgctcaccagcgccgccctcctgctgaaaccgtccgcg
ggccggtcccgcccggcacgggtgcgcgagccgtga
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