Nocardia terpenica: CRH09_24645
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Entry
CRH09_24645 CDS
T05168
Name
(GenBank) RNA polymerase subunit sigma
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ntp
Nocardia terpenica
Brite
KEGG Orthology (KO) [BR:
ntp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ntp03021
]
CRH09_24645
Transcription machinery [BR:
ntp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CRH09_24645
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ATL68894
UniProt:
A0A164P3U7
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All DBs
Position
5595896..5596864
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AA seq
322 aa
AA seq
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MTSPATTAVRASDSDLDAQSPAADLVRVYLNGIGKTALLTAADEVELAKRIEAGLYAQHL
LETGKRLSATRKRDLAFLVRDGQAARQHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNL
GLIRAMEKFDYTKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKLARIKREL
HQQLGREATDDELANESGIPVDKIADLLDHSRDPVSLDMPVGNDEEAPLGDFIEDSEATS
AESAVIAGLMHRDVRSVLATLDEREQQVIRLRFGLDDGQPRTLDQIGKLFGLSRERVRQI
EREVMSKLRKGERADRLRAYAS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgacaagccccgccaccactgcagtgcgcgccagcgattccgacctcgacgcccagagc
cccgccgccgacctggtacgcgtgtacctgaacgggatcggcaagacggcgctgctcacg
gcggccgacgaggtcgagctggccaagcgcatcgaggcgggcctctacgcccaacacctg
ttggagaccgggaagcgactgtcggccactcgcaagcgcgatctggcattcctcgtccgg
gacggccaggccgcccggcagcatctgctcgaggccaacctgcggctcgtggtgtcgctg
gccaagcgctacaccggccgcggcatgccgctgctggacctgatccaggagggcaacctg
ggcctgatccgggcgatggagaagttcgactacaccaagggcttcaagttctccacctac
gccacctggtggatccggcaggccatcacccgcggcatggccgaccagagccgcaccatc
cggctccccgtccacctcgtcgagcaggtcaacaagctggcccgcatcaagcgcgagctg
caccagcagctcggccgcgaggccaccgacgacgaactggccaacgagtcgggcatcccc
gtcgacaagatcgccgacctgctcgaccacagccgcgacccggtcagcctggacatgccg
gtcggcaacgacgaagaggccccgctgggcgacttcatcgaggactccgaggccacctcc
gccgagagcgccgtcatcgccggtctcatgcaccgcgacgtgcgcagcgtgctcgccacc
ctggacgagcgcgagcagcaggtcatccggctgcgcttcggcctcgacgacggccagcca
cgcaccctggaccagatcggcaagctgttcggcctgtcccgcgagcgggtccgccagatc
gagcgcgaggtcatgtccaagctccgcaagggcgagcgcgccgaccgcctgcgcgcctac
gccagctga
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