KEGG   Nocardia terpenica: CRH09_25390
Entry
CRH09_25390       CDS       T05168                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
ntp  Nocardia terpenica
Pathway
ntp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ntp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CRH09_25390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ntp03019]
    CRH09_25390
Messenger RNA biogenesis [BR:ntp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CRH09_25390
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: ATL69015
UniProt: A0A291RNW3
LinkDB
Position
complement(5757012..5759018)
AA seq 668 aa
MSEPVRRRPRRGASRAAGAPPPAPEPVQPQRKSRARSGSEAPQQVPVEAEIAAAPPETAP
AETEARVRGRAQSGRESDRGATTRRGGRGRQTGRDRGRAEQAAPQEIPVDPHSLPVPPAA
PKHGLRVFALGGIGEIGRNMTVFEYGGKLLIIDCGVLFPEDQQPGVDLILPDFRPIEDRM
GDVVAVVLTHGHEDHIGAVPFLLRQRPDIPVVGSKFTLALVAAKCREHRLQPKLIEVTEG
ERTTHGPFDCEYFAVNHSIPDALAVAVRTPAGLALHTGDIKLDQLPLDGRLTDLAGFSRL
GDEGVDLFLVDSTNAEVPGFVTPEREIGPVLDSVIGKARGRVIVASFASHVHRIQQVVDV
AQRYDRRVCFVGRSMVRNMQIAQDLGYLSIPDQIVVDLDQAATLPGHKLVLISTGSQGEP
LSALSRMARGDHRQINIRADDLVVLASSLIPGNENAVFAVVNGLARKGATVVTQQSAKVH
VSGHASAGELLYLYNAVRPTNAMPVHGEWRHLRANAALAVATGVPEDRVVLAEDGVVVDL
VDGIASIVGRYPVGQVYVDGLSVGDVGESTLSDRLILGEGGFISITVAVDEATGKTVTEP
EVSGRGFSDDPGALADAQKLVEAELHRLASEGITDTHRIAQGVRRVVGRWVAETYRRRPM
IVPTVIGV
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgagcgagccggtgcgccgtcgtccgcgccgaggcgcgagccgcgccgcgggcgcgccc
ccgcccgccccggaacccgtgcagccgcagcgcaagtcgcgcgcacggtcgggaagcgaa
gcgccgcagcaggttccggtcgaggccgagatcgccgcggcgccgcccgagaccgctccg
gcggagaccgaggccagggtccgcggccgggcgcagtcgggccgcgagtccgaccgcggc
gcgacgacccggcgtggtggccggggtcggcagaccggtcgcgatcgaggccgcgccgaa
caggccgcgccgcaggagattccggtcgatccgcacagcctgccggtgcccccggccgcg
ccgaagcacggcctgcgcgtcttcgcgctcggcgggatcggcgaaatcggccgcaacatg
acggttttcgagtacggcggcaagctgctgatcatcgactgcggcgtgctgttcccggag
gaccagcagccgggcgtcgacctgatcctgcccgacttccggcccatcgaggaccggatg
ggcgatgtggtcgcggtggtgctgacccacggccacgaggaccacatcggcgcggtgccg
ttcctgctgcggcagcggcccgacattccggtcgtcggcagcaagttcaccctcgcgctg
gtggcggccaagtgccgcgaacatcgcctgcagcccaagctgatcgaggtcaccgagggc
gagcggaccacgcacggcccgttcgactgcgagtacttcgcggtcaaccactcgatcccg
gacgccctcgcggtcgccgtgcgcaccccggcgggcctggcgctgcacaccggcgatatc
aagctggatcagttaccgctggacgggcggctcaccgacctggccgggttctcccggctc
ggcgacgagggcgtggacctgttcctggtcgactccaccaatgccgaggtgcccggcttc
gtcacgcccgagcgcgagatcggcccggtgctcgacagcgtgatcggcaaggcccgcggc
cgggtgatcgtcgcctcgttcgccagccatgtgcatcgcatccagcaggtggtcgacgtg
gcgcagcgctacgaccggcgggtgtgcttcgtcggccggtccatggtccgcaatatgcag
atcgcgcaggacctgggctatctgagcatccccgaccagatcgtggtggacctggatcag
gccgcgacgctgcccggccacaagctggtgctgatctcgaccggatcgcagggcgagccg
ctgtcggcgctgtcgcgaatggcgcgcggcgaccatcgccagatcaacattcgcgccgac
gatctcgtggtgctggcctcctcgctcatcccgggcaatgagaacgcggtgttcgcggtg
gtcaacggcctggcccggaagggcgcgacggtggtcacccagcagagcgcgaaggtgcac
gtgtccgggcacgcctcggccggtgagctgctgtacctgtacaacgcggtgcggccgacc
aatgccatgccggtgcacggcgagtggcggcacctgcgcgccaatgcggcgctggccgtc
gcgaccggtgtgcccgaggaccgggtggtgctggccgaggacggcgtagtcgtcgacctg
gtggacggcatcgcctcgatcgtgggccgctacccggtcggtcaggtgtacgtcgacggc
ctgtcggtcggcgacgtcggcgagtccacgctgtcggaccggctgattctcggcgagggc
ggcttcatctccatcaccgtcgccgtcgacgaggccaccggtaagaccgtcaccgagccc
gaggtcagcggccgcggcttctccgacgaccccggcgccctggccgacgcccagaaactg
gtggaggccgaactgcaccgcctggcgagcgagggcatcaccgacacccaccgcatcgcc
cagggcgtccgccgagtcgtcggccgctgggtcgccgaaacctaccgccgccgcccgatg
atcgtcccgaccgtcatcggcgtttaa

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