Nocardia terpenica: CRH09_25800
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Entry
CRH09_25800 CDS
T05168
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ntp
Nocardia terpenica
Pathway
ntp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ntp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRH09_25800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntp03019
]
CRH09_25800
03016 Transfer RNA biogenesis [BR:
ntp03016
]
CRH09_25800
Enzymes [BR:
ntp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CRH09_25800
Messenger RNA biogenesis [BR:
ntp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CRH09_25800
Transfer RNA biogenesis [BR:
ntp03016
]
Prokaryotic type
tRNA degradation factors
CRH09_25800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
S1_RRP5
PRC
Motif
Other DBs
NCBI-ProteinID:
ATL69080
UniProt:
A0A291RP34
LinkDB
All DBs
Position
complement(5833389..5835653)
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AA seq
754 aa
AA seq
DB search
MSDTVTSSAAEVEPGVFESVALIDNGKYGTRTVRFETGRLAKQAAGSVVAYLDDETMLLS
ATTAGKHPKDQFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPS
FVDGLRNEIQVVVTVMSLDPKDLYDVVAINAASASTQLAGLPFSGPVGGVRVALIEGQWV
AFPTTEQLEDAVFDMVVAGRVVESGDVAIMMVEAEATEKVIALVEGGAQAPTETVVAEGL
EAAKPFIARLCRAQADLAGLASRPTEEFPVFPPYEQDVYVAVEGTAKRPLAEALSIAGKQ
EREEKIDEIKLEVLSSLAEDFAGREKEIGAAFRSVTKKLVRQRILSDGFRIDGRGLADIR
ALSAEVAVVPRAHGSALFERGETQILGVTTLDMVKMAQQVDSLGPETSKRYMHHYNFPPF
STGETGRVGSPKRREIGHGALAERALIPVLPSQDEFPYAIRQVSEALGSNGSTSMGSVCA
STLSLLNAGVPLKAPVAGIAMGLVSDAVTNDQGEEEIRYVALTDILGAEDAFGDMDFKCA
GTRDFVTALQLDTKLDGIPSKVLAGALNQARDARLTILDVMAEAIADPDEMSPYAPRVTA
IKIPVDKIGEVIGPKGKVINQITEDTGANISIEDDGTVFVGATDGPSAQAAIDAINAIAN
PQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGNGKRVGKVEDVVNVGDKLRV
EIADIDNRGKISLVPVEEESETASDTAAAEAGAE
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataccgtgaccagctccgccgccgaggtcgaacccggcgtgttcgaatcggtc
gccctgatcgacaacggcaagtacggcacccgcacggtgcgtttcgagaccggtcgcctg
gccaagcaggccgccggttcggtcgtcgcctacctggacgacgagaccatgctgctgtcc
gcgaccaccgcgggcaagcaccccaaggatcagttcgacttcttcccgctgacggtcgac
gtcgaggagcgcatgtacgccgcgggccgcatccccggctcgttcttccgtcgtgagggc
cgcccctccaccgacgcgatcctgacctgccgcctgatcgaccgtccgctgcgcccgtcg
ttcgtcgacggcctgcgcaacgagatccaggtcgtcgtgacggtcatgagcctggatccc
aaggatctctacgacgtggtcgccatcaacgcggcctcggcgtccacccagctcgcgggc
ctgccgttctccggcccggtcggcggcgtgcgggtggcgctgatcgagggccagtgggtg
gcgttcccgaccaccgagcagctggaagacgccgtgttcgacatggtcgtggccgggcgc
gtggtggaatccggcgacgtcgccatcatgatggtcgaggccgaggccaccgagaaggtc
atcgccctggtcgagggcggcgcgcaggcgccgacggaaaccgttgtggccgagggcctc
gaggccgccaagccgttcattgcccggctctgccgcgcccaggcggacctggccggtctg
gcctccaggccgaccgaggagttcccggtcttcccgccctacgagcaggacgtgtacgtc
gccgtcgagggcaccgcgaagcggccgctggccgaggcgctgtccatcgcgggcaagcag
gagcgcgaggagaagatcgacgagatcaagctggaggtgctttccagcctcgccgaggac
ttcgcgggccgcgagaaggagatcggcgcggcgttccgctcggtcaccaagaagcttgtg
cgccagcgcatcctgtccgacggcttccgcatcgacggccgcgggctggccgatatccgc
gccctgtccgccgaggtggccgtggtcccgcgggcgcacggctcggcgctgttcgagcgc
ggcgagacccagatcctgggcgtcaccaccctcgacatggtgaagatggcgcagcaggtc
gactcgctcggcccggagacctccaagcgctacatgcaccactacaacttcccgccgttc
tcgaccggtgagaccggccgcgtcggttcgccgaagcggcgcgagatcggccacggcgcc
ctcgccgagcgcgccctgatcccggtgctgccgagccaggacgagttcccgtacgccatc
cgccaggtgtcggaggcgttgggctccaacggttccacctcgatgggttcggtgtgcgcg
tcgaccctgtcgctgctgaacgccggtgtgccgctgaaggcgccggtggccggtatcgcc
atgggcctggtgtccgatgcggtcaccaacgaccagggcgaggaggagatccgctacgtc
gcgctgaccgatatcctcggcgccgaggatgccttcggcgacatggacttcaagtgcgcc
ggcacccgcgatttcgtcaccgccctgcagctggacaccaagctcgacggcattccgtcg
aaggtgctggccggtgcgctgaaccaggcgcgcgacgcccgtctgaccatcctggacgtg
atggccgaggccatcgccgacccggacgagatgagcccctacgcgccgcgcgtcaccgcg
atcaagatcccggtcgacaagatcggcgaggtgatcgggcccaagggcaaggtcatcaac
cagatcaccgaggacaccggcgccaacatctccatcgaggacgacggcaccgtgttcgtc
ggcgcgaccgacggcccgtcggcgcaggccgcgatcgatgcgatcaacgccatcgccaac
ccgcagctgccgaaggtcggcgagcgcttcctcggcacggtcgtcaagaccaccgccttc
ggcgcgttcgtctcgctgctgccgggccgcgacggcctggtgcacatctccaagctgggc
aacggcaagcgcgtgggcaaggtcgaggacgtggtgaacgtcggcgacaagctgcgcgtg
gagatcgccgatatcgacaaccgcggcaagatctcgctggtgccggtcgaggaagagtcc
gagaccgcaagcgacactgctgcggccgaggccggtgccgagtaa
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