Novibacillus thermophilus: B0W44_00315
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Entry
B0W44_00315 CDS
T04694
Name
(GenBank) integration host factor subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
ntr
Novibacillus thermophilus
Brite
KEGG Orthology (KO) [BR:
ntr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ntr03032
]
B0W44_00315
03036 Chromosome and associated proteins [BR:
ntr03036
]
B0W44_00315
03400 DNA repair and recombination proteins [BR:
ntr03400
]
B0W44_00315
DNA replication proteins [BR:
ntr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
B0W44_00315
Chromosome and associated proteins [BR:
ntr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
B0W44_00315
DNA repair and recombination proteins [BR:
ntr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
B0W44_00315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Peptidase_C80
HU-DNA_bdg
HU-CCDC81_euk_1
DUF2267
DUF937
TFIIF_alpha
Motif
Other DBs
NCBI-ProteinID:
AQS54470
UniProt:
A0A1U9K356
LinkDB
All DBs
Position
57942..58214
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AA seq
90 aa
AA seq
DB search
MTKQELIQKIAAKSGLTKKDAESVLNTVLDEISQALKSGEKVQLIGFGTFETRKRSGRVG
RNPQTGESIEIPETTVPAFRAGSKLKEAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgactaagcaggaacttatccaaaaaatcgcggccaagagcggcctcaccaaaaaagac
gccgaaagtgttctgaatacggtattggatgagatttctcaagctttaaagtccggggaa
aaagtacagctaatcggtttcggcacgtttgaaacgcgcaagcggtccggcagagtcggg
cgcaacccgcaaactggggaatccatcgaaattccggaaacgacagtccccgcattccgc
gccgggagcaaacttaaagaagcggtgaagtag
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