Novibacillus thermophilus: B0W44_14775
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Entry
B0W44_14775 CDS
T04694
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ntr
Novibacillus thermophilus
Pathway
ntr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ntr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0W44_14775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntr03019
]
B0W44_14775
03009 Ribosome biogenesis [BR:
ntr03009
]
B0W44_14775
Enzymes [BR:
ntr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B0W44_14775
Messenger RNA biogenesis [BR:
ntr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B0W44_14775
Ribosome biogenesis [BR:
ntr03009
]
Prokaryotic type
rRNA helicases
B0W44_14775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AQS56822
UniProt:
A0A1U9K9V7
LinkDB
All DBs
Position
complement(3029174..3030760)
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AA seq
528 aa
AA seq
DB search
MIRFEDLGVEPTILKAIHDIGFEKPSPIQEKCIPKILEGVDLIGQAQTGTGKTAAFAIPI
LQRINSRYGKVQSIILTPTRELAIQVSGEIRRIGKNSRVKTLPIYGGQSIGRQIRALRQG
VHIVIGTPGRVLDHIHRRTLKLDAVNIMVLDEADEMLDMGFVDDIEEVMRHLPEERQMLL
FSATMPPEILRLSKRYMKQAKRISVNKGDVAAPSVTQVYYKVLEKNKLDGLCRILDSDDV
ELGIVFCRTKKGVDELAEALQSRGYLASALHGDLNQMQRNRVMQDFRNGRIELLVATDVA
ARGIDVSNVSHVINYDIPQDAESYVHRIGRTGRAGKSGIAMTLVTPREMKLLNTIHRETK
SSLEARNLPTLEEVAEKQQATWIEQVLNAIHDGGDDVKVFKETVQTLAREHGVDILDVAA
AALKLAFDERSPEADGYRFGETGAAPGMVRFFINAGKNIDMNPRDLVKTIADAADISDRE
IGKINIFDRFTFVEVPEEVAPFVFEALQQSRINGARINMEPARPREKR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
ttgattcgatttgaagaccttggcgtagaaccaacgattttaaaagcgatacacgacatt
gggtttgaaaaaccctcccccattcaagaaaaatgtatccccaaaattttagaaggcgtg
gacttgatcggacaggcccagaccggaacaggaaaaacggctgcttttgccattccgatt
ttgcagcggatcaactctcgctacggaaaagttcagagcatcatcctcacccctacccgt
gagctcgccattcaagtgtccggcgaaattcgccgcatcggaaaaaacagtcgggtcaag
acgttgccgatttacgggggccaatccatcggccgtcagatacgggccctcaggcaaggt
gtacacatcgtcatcggcacacccggccgcgtcttggaccacatccatcgccgaacgctg
aaactcgatgccgtcaacatcatggtgttggacgaagcggacgaaatgctcgacatgggg
tttgtcgacgatatcgaggaagtgatgcgccatttgccggaagagcgtcaaatgcttttg
ttctcggccaccatgcccccggaaatactgcgtctctccaaacggtacatgaaacaggcg
aagcgcatttcggtcaacaagggggacgtcgccgccccgtccgtcacgcaagtttactac
aaagtgctggaaaaaaataaactcgacggactctgccgcatattggacagcgatgacgtg
gagttggggatcgtgttttgtcgaaccaaaaagggtgttgacgaacttgcggaagctctt
cagtcccgggggtatttggcgagcgccctgcacggcgacctcaatcaaatgcagcggaac
cgggtgatgcaagacttccgcaacggccgaattgaactgttggtggcgaccgatgtggca
gcccgcggcatcgacgtgagcaacgtcagccacgtcatcaactacgatatcccgcaagat
gcggagagctacgttcaccgcattgggcgcaccgggcgcgccggaaagtcggggatcgcc
atgacgcttgtgacaccgcgcgaaatgaagcttttgaacaccattcaccgagagacgaag
tcatctttagaggcgcgcaacctgccgacgttagaagaagtggcggaaaagcaacaagcg
acgtggatcgagcaagtgttaaacgccatccacgacggcggcgatgacgtgaaagtgttt
aaagagacggtgcaaacgttggcccgggaacacggtgtagacattttggacgttgcggcg
gctgcattgaaactggcgtttgacgagaggtcccctgaggctgacggataccgtttcggg
gagacaggggcggctcccggcatggtgcgctttttcatcaatgctgggaaaaacattgac
atgaacccccgagatctcgtcaagacgatagcggatgcggccgacatttccgaccgggaa
atcggaaaaattaacatcttcgaccgctttactttcgtcgaagtcccggaagaagtggcc
ccattcgtatttgaagcgctgcagcaatcgcggatcaacggggcgcgcattaacatggag
ccggcccgtccgcgagaaaaaagatag
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