Novibacillus thermophilus: B0W44_14865
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Entry
B0W44_14865 CDS
T04694
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ntr
Novibacillus thermophilus
Pathway
ntr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ntr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0W44_14865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntr03019
]
B0W44_14865
Messenger RNA biogenesis [BR:
ntr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B0W44_14865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AQS56838
UniProt:
A0A1U9K9Y2
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All DBs
Position
complement(3050284..3051957)
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AA seq
557 aa
AA seq
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MSKQKESVRIFALGGLGEIGKNMYVVEDGKDIVVIDCGIMFPEEEMLGIDVVIPDITYLV
ENKERVRGILITHGHEDHIGALPYVLKELNVPVYGTKLTLGLLENKLREANMLNGTKRIL
VNSESKVKLGRLTATFFKTNHSIPDSVGICLETSVGTIVHTGDFKFDQTPVNGQYADYYK
MAQIGERGVLCLLSDSTNAERPGFTGSEKDVGEAINDVFHKATQRIIVATFASNMHRVQQ
VIDAAEKNHRKVCIIGRSMVNVVNIGIELGYLRVPDGILIEPDEVNRLPAHEVVILSTGS
QGERMSALARMASGSHRKFEIMPGDTVIIAATPIPGNEKYVARTVDQLFRLGANVVYSSG
GAHSVHVSGHGSQEDLKLMLNLMKPKYFIPIHGEYRMLRVHAQLAESTGVKPENVFICDI
GDSVEITKDGARFGPKLPTGNILIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQKG
TILSGPDIISRGFVYVRESEKLLEEANEIVSETLEKCMDDNVNEWASLKTSVREELGRYL
YEKTRRRPMILPIIMEV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaaacaaaaagagagcgtgaggatatttgctctcggtggtttgggcgagattggg
aagaacatgtacgtcgtggaagacgggaaagatatcgtggtcatcgattgcggtattatg
tttccggaagaagagatgcttggcatcgacgttgtcattccggacattacgtacctcgtg
gaaaataaggaacgggttcggggaattttaattacacacgggcacgaagaccacattggc
gcgttgccgtatgtgttaaaagaattgaacgttcccgtctacggtacgaagttaacactt
ggcttgctggaaaataaattgcgggaagccaatatgttaaatgggacaaagcgcatttta
gttaacagcgaatctaaagttaagttgggcagactgacggccacgtttttcaagacgaac
cacagtataccggacagcgtgggtatctgtttggagacgtctgtcggcacaatcgtgcac
accggcgatttcaaatttgatcaaacgcccgtgaacggtcaatacgctgactactacaaa
atggcccaaattggcgaacggggtgtactgtgtctgctttcagacagcaccaacgccgaa
cgtccaggctttaccgggtcagaaaaggacgtcggtgaagcgatcaatgacgtattccac
aaagcgacacagcgcattatcgttgcaacgtttgcttcgaatatgcaccgtgtgcaacaa
gtgatcgacgcggcggaaaaaaaccaccgcaaagtgtgcattatcggaagaagtatggtc
aacgtcgtcaacatagggattgaactcggttacttgcgcgttccggacggcatactgata
gagcctgatgaagtgaatcggttgccggctcacgaagttgtcattttgtcgacaggaagc
cagggagagcgtatgtctgctttggcgcgcatggcttctggctcgcaccggaaatttgaa
atcatgcccggggacaccgtcattattgcggcgaccccgattccgggtaatgaaaagtac
gttgcgcgaacggtggaccaactgttccgtctaggagcgaatgtcgtatacagttcaggt
ggtgcacacagtgtccacgtttcgggacacggcagtcaggaagatttaaagctcatgctc
aacttaatgaaaccgaagtactttattcctatccacggggaataccgtatgttacgtgtt
catgcccaactcgcagaatccactggagtaaagccagaaaatgtatttatttgtgatatc
ggtgactcagtcgaaattacgaaagacggggcgcgtttcgggcccaaactgcccacaggg
aacatattaattgacggacttggggtaggagatgttggaaacattgtactacgagaccgc
aaacttttgtcacaagacggaattttagtcgttgtcgtcacattgagcaagcaaaaaggc
acgatcctgtcgggaccagacattatttcccgcggatttgtttacgtccgagagtccgag
aaactgctggaagaagcgaacgagattgtaagtgagacactggaaaagtgtatggatgac
aatgtgaacgaatgggcttccctgaagacgagcgttcgtgaagagttaggaaggtatttg
tacgaaaaaacgcgccgccgtccgatgattttgcccatcatcatggaagtgtaa
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