Candidatus Nitrosoglobus terrae: TAO_0287
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Entry
TAO_0287 CDS
T05173
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ntt
Candidatus Nitrosoglobus terrae
Pathway
ntt03420
Nucleotide excision repair
ntt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ntt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TAO_0287
03430 Mismatch repair
TAO_0287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntt03400
]
TAO_0287
Enzymes [BR:
ntt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TAO_0287
DNA repair and recombination proteins [BR:
ntt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TAO_0287
MMR (mismatch excision repair)
Other MMR factors
TAO_0287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
DUF6658
Motif
Other DBs
NCBI-ProteinID:
BAW79657
UniProt:
A0A1Q2SKL7
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All DBs
Position
complement(299445..301607)
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AA seq
720 aa
AA seq
DB search
MDISSLLAPLNQAQRKAVAAPLGHHLVLAGAGSGKTRVLTHRIAWLIQSQGISPSNLLAV
TFTNKGAGEMKERIENLLATPINAMWVGTFHGLTHRLLRIHWQEAQLPQAFQVLDSEDQY
RLIRQVLQNLNLDEDRWSPRKIQWFINSHKDKGLRPQHIEDGDNANTWQMIRIYHNYQDY
CNRNGLVDFAELLLRAYELWRNHAPLLSHYQNRFTHILIDEFQDTNAIQYAWLQLLAGDK
GALFIVGDDDQAIYGWRGARVENIQQLTQDFPTIGITRLEQNYRSTQIILAAANAVIAHN
AERLGKNLWTQDQGGELIQIYRAFDERDEARFIVERSLAWQAQGRARADIAVLYRSNAQS
RVLEEMLLQARIPYRIHGGLRFFERAEIKDTFAYLRLMIHRDNDPAFARIVNTPPRGIGD
RTLAQIREKAQQAQISLWQATTQLIITRYLPQRAMHALYEFQQLIENITIAIEEFSLPQK
IELTLNRSGLLSHYQKDSSERGQSRLENLKELMNAAAQFKPEEPHLNLLSAFLAHTTLES
DDNTSSEGWEDCVQLMTLHAAKGLEFPLVFITGMEEGLFPSPKSLDEPTGLEEERRLCYV
GMTRARNHLYLIHADQRRLYGSNSCPKPSRFIREIPAKLICELRPQTYTPINSPITHKPE
WNLVANNTDFQFGQRVRHHKFGEGTILDLEGEGDAIKIQVNFNQIGPKWLSLTYAKLQII
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggatatttcttctctacttgccccgctgaatcaagcccagcgtaaggcagtcgctgcc
ccattagggcaccatttagtgcttgccggtgccggcagcggtaaaacccgggtattgact
catcgaattgcttggcttattcaaagccaagggatctctccttctaacctgctagcagtg
acctttactaataaaggcgctggagaaatgaaagagagaatcgaaaatctactagcaact
cctataaatgctatgtgggtaggtacttttcatgggcttacccaccgcctgctacgaatc
cactggcaagaagcccaattgcctcaagccttccaagttttggattctgaagatcaatat
cgcttgattcgtcaagtgttacaaaatctcaatttagatgaagatcgatggtcacctcgt
aaaattcagtggtttatcaacagtcataaagacaaagggctacggcctcaacatattgaa
gatggggataacgctaacacttggcaaatgatccggatctatcataactatcaagattac
tgtaatcgcaatggcttggtagattttgccgagcttttattacgcgcttatgagctatgg
cgaaaccacgcccccctgttgtcccactatcaaaatcgctttacccatattttgatagat
gaatttcaagatacgaatgccattcaatatgcttggctacagttgcttgcaggagataaa
ggcgcgctttttattgtcggtgatgatgatcaagctatctatggctggcgtggcgctagg
gttgaaaacattcaacaactgacgcaggattttccgaccataggcatcacccgcttagag
caaaattatcgctcaactcagattatccttgcagcagccaatgcggttattgcgcataac
gcggaaaggctagggaaaaatctctggactcaagatcaaggtggtgagcttatccaaatt
tatcgcgcctttgatgaacgggatgaagctcgctttatcgttgagcgtagcctagcttgg
caagcgcaaggtagagcacgagctgatattgctgtactctatcgatcaaacgcccaatct
cgtgtacttgaagaaatgcttctccaagcccgtatcccttatcgaatccatggagggctg
agattttttgagcgggctgaaattaaagatacctttgcttatctacgcttaatgatccat
cgagataatgatcccgctttcgcccgcatcgtaaatacgcctcctcgcggaattggggat
cgaaccttagcccaaattagagaaaaagcccagcaggcgcaaatttctttatggcaagcg
acaactcagcttattatcacacgataccttccccaacgggctatgcatgccctttatgaa
tttcaacagctgatcgagaacattacgatagccatcgaggagttctctcttcctcagaaa
attgagcttacacttaatcgcagtggcttactgagccactatcaaaaagattccagcgaa
cggggccaatcccgtcttgagaacctaaaggagcttatgaacgcagcagctcaatttaaa
cctgaagaacctcaccttaatctattatctgcattcctagcccatactacattggagtcg
gacgataatacctcatcagagggctgggaggattgcgtacagctcatgactttgcatgca
gcaaaggggctagagtttccattagtatttataaccggcatggaagaaggcttatttcca
agccctaaatctcttgatgaacccacaggacttgaggaagaacgccgcctctgttacgtc
ggtatgacccgtgcccgtaatcatctgtatctcatacacgccgatcagcgtcgactttat
ggatcaaacagctgccctaaaccctctcgatttatccgtgagattccagccaaactaatc
tgtgaacttagaccacaaacatatacccccattaatagccctatcacgcataaacctgaa
tggaatcttgttgctaataacactgatttccaatttggccaacgagttaggcatcataaa
tttggcgagggaacaatattagaccttgaaggagagggagatgcgataaaaatacaagta
aattttaatcaaataggccctaaatggctatctttaacctatgctaagctccaaattatt
taa
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