Candidatus Nitrosoglobus terrae: TAO_0538
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Entry
TAO_0538 CDS
T05173
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ntt
Candidatus Nitrosoglobus terrae
Brite
KEGG Orthology (KO) [BR:
ntt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntt03019
]
TAO_0538
03009 Ribosome biogenesis [BR:
ntt03009
]
TAO_0538
Messenger RNA biogenesis [BR:
ntt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TAO_0538
Ribosome biogenesis [BR:
ntt03009
]
Prokaryotic type
rRNA processing factors
TAO_0538
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
BAW79908
UniProt:
A0A1Q2SLB0
LinkDB
All DBs
Position
574585..576066
Genome browser
AA seq
493 aa
AA seq
DB search
MSEEILINVMPNETRVAVVENGIMQELYIERGSRRGLVGNIYKGRVSRVLPGMQAAFVDI
GLDRAAFLHASDIRLPTGQLGNLESKMGAEVPPTITSLLTEGQEVLVQVIKDPIGAKGAR
LTTQISIASRYLVYMPEMSGVGVSLKIDNEADRQRLKDLLASIWPEDDQGGYIIRTVAEG
AVEADLRADIEFLRKLWHLIKERARMTKAGSIIHEDLSLVIRTMRDLVREKVERVRVDSR
ETYFKLVDFSNRFISDLFTTIEHYQGERPIFDLYGIEDEIQKSLSRKVQLKSGGYLIIDQ
TEAMATIDVNTGAFVGHRNLEETIFKTNLEAVQAICRQLRLRNLGGIIIIDFIDMEEEDH
KRQVLRALEHGLEKDHAKTYISEVSSLGLVEMTRKRTRESLEQILCEPCPTCSGRGTVKT
VETVCYEILREVLREAKQFEASRYLVIAAQEIVDRLMDEESTHVAELEAFIGKPIKFQPE
LLYMREQFDVVMM
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaggaaatcctcatcaatgtcatgcccaatgagactcgggttgctgtagttgaa
aatggaataatgcaggaattatatattgaacgcggtagtcgtcgaggtttggtgggcaat
atttataaagggcgagtaagccgggtgttacctggtatgcaagccgcttttgtagatata
ggtttggatcgagctgcttttctccatgcttctgatattcgattgcctactggccagcta
ggaaatttagagagcaaaatgggagcggaagtacctcctactattacctctctgctcaca
gaagggcaggaagtattagtgcaagtgatcaaggatccaattggggctaagggggcgcga
ttaactacccagatttctatagcttcccgttatttagtttatatgccagaaatgtctggt
gttggagtttcattaaaaattgataatgaggcggatcgccaacggctcaaagatttatta
gcttctatatggcctgaagatgatcaaggaggttatatcattcgcacggtagcggaaggg
gcagttgaagccgatcttcgtgcggatatagagtttctgcgtaagctttggcatcttatt
aaagagcgcgctcgaatgactaaagcaggcagtattattcatgaagatctttctttagta
atacgaaccatgcgtgatcttgtgcgtgaaaaggtagagcgagttcgcgttgattctcgt
gagacttatttcaagttagttgatttctctaatcgttttatctcagatctttttaccact
attgagcactatcaaggggagcggcctatttttgatctctatggtattgaggatgaaatt
caaaaatctttaagccggaaggtacagcttaaatccggtggctatttgattatcgatcaa
acagaggcgatggccacaattgatgttaatacaggggcttttgtaggtcatcgtaatctg
gaggagactatttttaaaactaatttggaggcagtacaggctatctgtaggcagctgagg
ttacgtaatcttgggggtattatcattattgactttattgatatggaggaagaggatcat
aagcggcaggtattacgcgcgttggaacatggattagaaaaggatcatgctaaaacgtat
attagtgaggtctcctctttggggttagtggaaatgacccgcaaacgtactcgcgaaagc
ctagagcagatactttgtgagccttgccctacttgcagtggcagaggtacggtgaagact
gtagaaaccgtatgttatgaaatcctgcgggaggttttacgtgaagccaagcagtttgaa
gctagccggtatttagtgattgctgctcaagaaatagtggatcggttaatggatgaggaa
tcgacccatgttgctgagctagaagcctttataggtaagcctataaaatttcagcctgaa
ttactctatatgcgagagcaatttgatgttgtaatgatgtaa
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