Candidatus Nitrosoglobus terrae: TAO_0652
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Entry
TAO_0652 CDS
T05173
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ntt
Candidatus Nitrosoglobus terrae
Pathway
ntt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ntt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TAO_0652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ntt03021
]
TAO_0652
03400 DNA repair and recombination proteins [BR:
ntt03400
]
TAO_0652
Enzymes [BR:
ntt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TAO_0652
Transcription machinery [BR:
ntt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TAO_0652
DNA repair and recombination proteins [BR:
ntt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TAO_0652
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
BAW80022
UniProt:
A0A1Q2SLM4
LinkDB
All DBs
Position
690134..694219
Genome browser
AA seq
1361 aa
AA seq
DB search
MSYSLTEKKRIRKDFGKLHSILKIPFLLAIQIDSFLDFLQTDVPPDKRTNKGLHAAFKSV
FPIKSYTEYAELQYVSYYLGDPLFDVKECQIRGLTYAAPLRVKLRLIIYDRESPASEQII
KDVKEQEVYMGEIPLMTPKGNFVINGTERVIVSQLHRSPGVIFEHDKGKAHSSGKVLFSA
KIIPYRGSWLDFEFDPKDCVYARIDRRRKLLATVLLRALGYSTEEILTIFFETNAVCRQD
SGYLFSFTPQQLRGESLPFDIKNPNGGELIVEAERRVTARHIKQMEKAGIKNLFVPNEFL
IGKILAQDLVDADTGEILAKANDEITAGLIATIESTGIQNFDLIYINDLDRGSFISDTLR
LDHTTTSLEAQIEIYRVMRPGEPPTKEAAQNLFQNLFFSPDRYDLSAVGRMKFNRRLRRN
EIDGSGTLSKEDIVDVIKTLVNIRNGYGSVDDVDHLGNRRVRSVGEMAENQFHVGLIRVE
RAVRERLGLAESEGLMPQELINAKPISAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRVSA
LGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAIYARTNQYGFIETPYR
KVVEGKVTDQVEYLSAIEEGQYVISQANAAIDEKSYLADMLVSCRYKNEFTLLPPEKVQY
IDVSPKQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRAEAPLVGTGIEQAVARDS
GVMVVARRGGVVHSVDAARIVVRVNDEETVPDKQGVDIYNLTKYARSNQNTCINQRPLVK
LGDVVVAGDVLADGPSTDMGELALGQNLLVAFMPWNGYNFEDSILISERVVEKDRFTSIH
IEELICLARDTKLGSEEISSDIPNVSEAALSKLDESGVVYIGAEVKPGDILVGKVTPKGE
TQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMHGTVIDVQVFTRDGIEKGLRALQIEEME
LAKIKKDLWDEFRIVEADIYQRLEKMLLGEIVEGGPAELRTGNQITKNYLMSLSRERWFD
IRLRSEGANKQLELAAGQLKEQRVLMDEKFEQQKIKFTSGHDLAPGVQKMIKVYLAVKRR
TQPGDKMAGRHGNKGVISAIVPIEDMPYMEDGTPIDMVLNPLGVPSRMNIGQILEAHLGW
AAKEIGHKIGSLLDSGEAYVSKLRVFLEQIYNTSGKKENLDSLSDEEIRELAHNLRDGVP
MATPVFDGASEEEIKAMLRLADLPTNGQTTLYDGRTGQAFSRPITVGYMHMLKLNHLVDD
KMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALESYGAAYTLQEMLTVKSDDVSGR
AKMYKSIVDDDYRMEANMPESFNVLTKEIRALGIDIELECD
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgtcttactcgttgaccgagaagaagcgtattcgtaaggattttggtaagcttcatagt
atattaaaaatccctttcttattagctatacaaattgattctttcttagattttttacaa
acagatgtaccacctgacaagagaacgaataaggggttacatgcagcatttaagagtgta
tttcctattaagagctatacagagtatgctgagctgcaatatgttagttattatctaggc
gatcccttatttgatgtaaaggaatgccaaattcgaggtttgacttatgccgctccgttg
agagttaagttacgtcttatcatctatgatagagagtccccagctagtgagcaaataatc
aaagatgtgaaagagcaagaagtatatatgggtgaaattcccttgatgacgccaaaaggc
aattttgttatcaatggaacagaacgagttattgtttcccaactgcaccgctctccaggg
gtaatctttgagcatgacaagggaaaagctcattcttcaggaaaagtccttttttctgca
aaaataattccttatcggggatcttggttagatttcgaattcgatcctaaggattgcgta
tatgcccgtatcgatcgtcgacgtaagctactcgcaactgttttattacgtgcccttggt
tatagtactgaggaaattttgacgatattctttgagactaatgctgtttgtcgccaagac
tcagggtatttatttagtttcaccccgcaacagcttcgtggcgagtctttaccttttgat
attaagaatcctaatggcggtgagttaattgttgaagctgagcggcgagtaacagcacgg
catattaagcaaatggaaaaagcggggattaagaatttatttgtacctaatgagttttta
ataggaaaaatcttagcccaagatctagttgatgctgatacaggagaaatattagctaaa
gctaatgatgagattacagcaggattgatagcaaccatagaaagcaccgggattcaaaat
tttgatcttatttatattaatgatctagaccgtggatcttttatctcagataccttacgg
ctggatcatactaccacatccttagaagctcaaatagaaatctatcgtgtcatgcgccct
ggggaaccaccaactaaagaggctgcgcagaatttatttcagaatttattctttagcccg
gatcgctacgatctctctgcagtaggacgaatgaaatttaatcgtcggcttaggagaaat
gaaattgatggctcaggcacgttatctaaagaagatatagttgatgttataaagacttta
gtgaatatccgtaatggatacggtagcgtagatgatgttgatcatttaggtaaccgtcgg
gtacgcagtgttggtgagatggcggaaaatcagtttcatgtaggattgattcgagttgag
cgagcagtgagagagcgtttgggtttagctgagtcagaggggttaatgcctcaagagttg
attaatgcgaagcctatatcggcggcgattaaggagttctttggctccagccaattatca
caatttatggatcaaaataaccctttgtcagaagtgactcataaacgccgagtatcagcg
ctagggccaggaggattaactcgagaaagagctgggtttgaggtgcgagatgtacaccct
acccattatgggcgtgtttgccctattgagacacccgaaggcccaaatattggactcatc
aattctttagcaatctacgctaggactaatcaatatggttttattgaaacaccgtatcga
aaggttgtcgaaggtaaagttaccgatcaggttgaatatctatcagccattgaggaaggg
cagtacgtaatttctcaggcaaatgcagctattgatgaaaaaagctatttagctgatatg
ctggtttcatgccgttataagaatgaatttacacttttaccgccagagaaagtgcagtat
atagatgtgtctcctaaacaaatcgtatcagtagctgcatctttgatcccttttttagaa
catgacgatgccaatcgggcattaatggggtcgaatatgcagcgtcaagcagttcctacc
ttaagggctgaagctcctctagtgggtactggtatagaacaggctgtagcccgtgattca
ggagtaatggttgttgctcgtcgaggcggagttgtacactctgtagatgcagctagaatt
gtagtacgtgttaatgatgaggaaactgtccctgataagcagggtgttgatatttataat
cttactaaatatgctcggtcaaatcaaaatacatgtattaatcaacgacctttagtaaag
ttgggggatgtggtagtagcaggagatgtgttagctgatggcccctctacagatatgggt
gaattagctttaggccaaaatctcctcgtagctttcatgccttggaatggttataacttc
gaggattcgatcctgatttctgagcgagtggtggaaaaggatcgcttcacgtcaatccat
attgaagaacttatttgcttggctcgagatactaagctgggatcagaagaaattagcagc
gatatcccaaatgtaagcgaggcagctttatctaaactagatgaatcaggcgttgtatat
attggagctgaggtaaagcctggagatattttagtaggtaaggtaactcctaaaggtgaa
acccagttaactccagaggagaagctactacgggcaatctttggggagaaagcttctgat
gtaaaagatacctctctacgtgtaccttcaggaatgcatggtacagttatagatgttcag
gtttttacccgggatggtatagagaaaggattgcgagctttacagatagaggagatggag
ttagctaagattaaaaaagacctatgggatgagtttcgcattgtagaggctgatatttat
cagcgcctagagaaaatgctattaggtgaaattgttgagggaggtccagcagaattaaga
acagggaatcagattacaaaaaactatcttatgagtttatctagagagcgttggtttgat
attcggctacgtagtgagggagctaataagcagctagagcttgctgcagggcagcttaaa
gagcaacgagtcttaatggatgagaaatttgagcagcagaaaattaaatttacttctggg
catgatttagcccctggtgttcaaaaaatgattaaagtctacctagctgtaaagcgccgt
actcaaccgggggataagatggcaggtcgacatggaaataagggtgtgatttctgctatt
gtccctattgaagatatgccctatatggaggatggaacccctattgatatggtgctgaat
cctttaggtgtaccttctagaatgaatattgggcagattttagaagctcatttagggtgg
gctgcaaaagaaattggtcataaaattggctctcttcttgattcaggagaagcgtatgta
tctaagctacgtgtttttctggagcaaatctacaatacaagtggtaaaaaagaaaactta
gattctttaagcgatgaagagatacgagagcttgcgcacaatctacgtgatggtgttcct
atggcaacaccggtatttgatggtgcttctgaagaggaaataaaagctatgctgagatta
gctgatttaccaaccaatggccaaacaaccctctatgacggtagaacagggcaggctttt
tctcgtccgataacagtaggatatatgcatatgcttaagttaaatcatttggttgatgat
aagatgcacgctcgatcaactggcccttatagcttagttacccagcagcctctaggtgga
aaagctcaatttggtgggcagcgttttggtgagatggaggtatgggcattggaatcttat
ggcgctgcatatactttacaggaaatgcttacggtgaaatctgatgatgtaagcgggcgg
gctaagatgtacaagagtattgtagatgatgattatcgaatggaagcaaatatgcctgaa
tcctttaatgtgttaaccaaagaaatccgcgccttaggaatcgatattgaattagaatgt
gattaa
DBGET
integrated database retrieval system
