Candidatus Nitrosoglobus terrae: TAO_0653
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Entry
TAO_0653 CDS
T05173
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ntt
Candidatus Nitrosoglobus terrae
Pathway
ntt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ntt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TAO_0653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ntt03021
]
TAO_0653
03400 DNA repair and recombination proteins [BR:
ntt03400
]
TAO_0653
Enzymes [BR:
ntt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TAO_0653
Transcription machinery [BR:
ntt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TAO_0653
DNA repair and recombination proteins [BR:
ntt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TAO_0653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
BAW80023
UniProt:
A0A1Q2SLN4
LinkDB
All DBs
Position
694291..698508
Genome browser
AA seq
1405 aa
AA seq
DB search
MKDLLNLLNQQNQVDEFDSIRIGLASPDMIRSWSYGEVKKAETINYRTFKAERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVVCEKCGVEVTLAKVRRERMGHIELASPIAHIWFLKSL
PSRISLLLDMTLRDIERVLYLESSVVIDPGMTPLERGQILSDESYLQAIEEYGDEFDARM
GAEAVQKMLKTLDLKKEANKLHEEIAGTNSDNKIKKLSKRLKLIEAFIDSGNKPEWMILE
ILPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGTNKLPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKKMALELFKPFIFGKLERSGLATTIKAAKKLVEREVPEVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLVCVAFNADFDGDQMAVHVPLSLEAQLEA
RALMMSTNNILSPANGEPIIVPTQDVVLGLYYMTCERVNAKGEGMIFADISEVQRAYETG
VVDLHAKISVRITETDLSKCNAERKTIRLVNTTVGRALLSELLPPGLPFELVNKSMTKKE
ISKLVNTCYRRLDLKTSVVFADRLMYLGFRQSTLSGISIGIDDMVVPAEKQGILAKAEKE
VKEIEEQYASGLVTNGERYNKVVDIWSHTNDQVAKAMMERLGSENVQDAEGNIVKQQTFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLDVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTERDCGTTKGINMSPLVEGGDIVEPLQERVL
GRVLSQDVCIPGGNEVAIPAGTLLDESWIDRFEDLGIDTVKVRSPITCETRYGVCAACYG
RDLGRGHLVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAVTTSSIAIKYKGNIRL
HNVKVIQHISGKYVAVSRSGEVHVVDEQGRERERYKIPYGAELSVGDGDSVEAGQSVATW
DPHTHPVITEVEGKVQLHGFIEGTTVERQADEVTGLSSLTVLDPKQRGAAAKELRPMVKL
IDDLGNDLCLAGTDIPAHYYLPAGAIVSVEDGAIVGVGDVLARLPQESSKTRDITGGLPR
VADLFEARKPKDTAVLAEISGIVSFGKETKGKQRLIITSSDGDRRHEELIPKWRQVNVFE
GEHVEKGEIIVDGSPTPHDILRLRGVEELAHYIVTEVQDVYRLQGVKINDKHIEVIICQM
LRKVEIVDSGDTNFLRGEQVDRSRLLEENERVEKENKIPARFEPILLGITKASLATESFI
SAASFQETTRVLTEAAITGKRDELRGLKENVIVGRLIPAGTGLAYHTRRCHKRQVLASSE
ALITAADPFPQNHENETSDSGAATT
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttgctgaatttacttaaccagcaaaaccaggtagatgagtttgactccata
cgtattggtctagcatctccagatatgattcgatcttggtcatatggagaggttaagaag
gctgaaactattaattaccgaacttttaaggctgagagggatgggctcttttgtgccaaa
atttttggccctgtgaaagattatgagtgtttatgcggaaaatataaacgtcttaaacat
cgaggtgttgtttgcgagaagtgtggagttgaggttactttagctaaagttcgcagagaa
cgtatggggcatattgagttagcaagccctattgctcatatttggtttttaaaatctttg
ccttcgaggatcagcttactgttagatatgactctccgtgatattgagcgagtcctctac
ttggagtcttccgtagttatcgatccaggtatgacccctttagagagaggacagatttta
tctgacgaatcttatcttcaagcgattgaagagtatggtgacgaatttgatgctcgtatg
ggcgctgaagcagtccaaaaaatgctaaagaccctcgatctcaagaaagaagctaataaa
ttacatgaggagatcgcgggaactaactccgacaataaaattaagaagcttagtaagcgg
ctgaagcttattgaagcttttattgattcaggtaataaaccagagtggatgattttggaa
attctcccagtattaccaccagatttacggcctttagtacctttagaaggagggcggttt
gctacctctgatcttaatgatttataccggcgagtaattaatcgaaataatcggcttaaa
cgattactagatttaaatgcaccagatattatcgtacgcaacgagaagcgtatgttacaa
gaatctgtagatgctcttttggataatggtcgccgtggtcgggctattactggcaccaat
aaactgcctttaaaatcattagcagatatgattaaaggtaaacaagggcgatttcgccag
aatcttttaggtaaacgagtagattactccggccgatctgtgattgtagttggcccgact
cttaagctacatcaatgcggtttgcctaagaaaatggcgttagagttatttaagcctttt
atcttcggtaagctagaacgatctgggcttgccactacaatcaaggcagcaaaaaaattg
gtggagcgagaagttcccgaggtttgggatatattagaggaagttatccgtgaacatccc
gtgatgcttaatcgtgccccaactttgcatcggcttggtatccaagcgtttgaaccagtg
ctagttgagggtaaggcgatccagctacatcctttagtgtgtgtagcttttaatgctgat
tttgatggtgatcagatggcggttcacgtgccactctctttagaggctcagctagaggct
cgtgcgcttatgatgtctacaaataacattctatcccccgctaatggggagcctattatc
gtacctactcaggatgtagttttagggctttattatatgacctgtgagcgggtgaacgct
aaaggtgaagggatgatttttgctgatattagtgaggtacagcgagcctatgaaacaggg
gtagtcgatctacatgcaaaaatttcagtgcgtattactgagacagacctttctaaatgc
aatgctgagcgtaaaactatccgtcttgttaacactacagtagggcgagcattactttca
gagttattgccgccggggttaccttttgagttagtcaataaaagtatgactaagaaggaa
atttctaagctggtaaatacctgttatcgtcgtctcgatcttaaaacttcagtagtgttc
gctgatcgtttaatgtatcttggttttcgccaatctacccttagcggtatttctattggt
attgatgatatggtagtgccagcagagaagcaaggtatccttgctaaggcagaaaaggaa
gttaaggaaattgaggagcagtatgcctcaggtttagtaactaatggcgagcgatacaat
aaagtagtagatatttggtctcatactaatgatcaagtcgctaaagcaatgatggagcga
ttggggagcgagaatgtacaggatgcagagggtaatatagttaagcagcaaacattcaat
tctatttatatgatggctgactctggggcacgaggatcagctgctcagattcgtcagctt
gctggtatgcgtggcttaatggcaaagccagatggttccattattgaaaccccaattact
gctaactttcgtgaggggcttgatgttctacagtattttatttctacccatggagctcgt
aagggtctagctgatacagcattaaaaacagctaattcaggatatctgactcggcgttta
gtggatgtagcccaagatttagtggttacagagcgtgattgtggtactacaaaaggaatt
aatatgtcccctcttgtagagggcggcgacattgtagagccgttacaagagcgagtcctt
gggcgagtgttatcacaagatgtttgtatacctgggggtaatgaagtagctataccggcc
ggtacgttattggacgagtcgtggattgatcgctttgaggatttgggtatagataccgtg
aaggtacgctcgcctattacctgtgaaacacgctatggggtttgtgctgcttgctatggt
cgggatttaggccgtggacatcttgtgaatattggtgaagcggttggtgtaattgcagct
caatctattggtgagccaggcacgcagcttacaatgcgtacttttcatatcggaggggcg
gcatcccgagcagttacaactagcagcattgcaattaagtataaaggtaatattcggcta
cacaatgttaaggttattcaacatataagtggcaaatatgtcgccgtctctcgctctggt
gaagtccacgtagtagatgaacagggacgagaacgagagcgttataaaattccttatggt
gccgaactgtctgtaggggatggtgattcggtagaggcaggtcaaagcgtcgctacttgg
gatccacatactcatcctgttattacagaagtagaaggtaaagttcaacttcatggtttt
atagaaggcaccacagtagagaggcaggctgatgaagtgaccggtttatcaagtcttact
gtgcttgatcctaaacaacgaggtgcggctgctaaagaactacgcccgatggtcaagctg
atcgatgatttaggaaatgatctatgccttgctggaacagatattcctgctcattattat
ttgccagcaggagctattgtttcagtagaagatggagctatagttggggttggagatgta
ttggcaagattacctcaagagtcaagtaaaactcgcgatattactggtggtctaccaaga
gtagcggatttatttgaggcccgtaagccaaaagatacagctgtgcttgctgagatttca
gggatagtgagttttggtaaggaaactaagggtaagcagcgattgattattactagcagc
gatggagatcgccgtcatgaagagttaattccaaaatggcgacaagttaacgtatttgag
ggtgagcatgttgaaaagggtgaaataattgtggatggatcaccaacacctcatgatatt
ttacgtttaagaggggtagaggaattagctcattatattgttactgaagttcaggatgtt
tatcgtcttcagggggtgaaaattaatgataaacatattgaggttattatttgccagatg
cttcgtaaagtggaaatagtagattctggggatactaattttcttagaggagagcaggtt
gatagatcaaggctgttggaagaaaatgaaagagtagagaaagaaaataaaattccagcg
agatttgaacctatactccttggtattactaaggcttctttagcaaccgaatcttttatt
tcggcagcctctttccaagaaactacacgtgtacttacagaagcggcaataacgggtaaa
cgtgatgagctacgtgggttgaaagaaaacgttattgtagggcgtttaattcctgctgga
acaggactagcttatcacactaggcgatgtcataagcggcaggtattagcttcatcagaa
gctttaattactgctgcagatccatttccccaaaatcatgaaaatgaaacttctgattcg
ggagcagctactacttga
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integrated database retrieval system
