Candidatus Nitrosoglobus terrae: TAO_0683
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Entry
TAO_0683 CDS
T05173
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ntt
Candidatus Nitrosoglobus terrae
Pathway
ntt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ntt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TAO_0683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ntt03021
]
TAO_0683
03400 DNA repair and recombination proteins [BR:
ntt03400
]
TAO_0683
Enzymes [BR:
ntt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TAO_0683
Transcription machinery [BR:
ntt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TAO_0683
DNA repair and recombination proteins [BR:
ntt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TAO_0683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BAW80053
UniProt:
A0A1Q2SLR5
LinkDB
All DBs
Position
715353..716345
Genome browser
AA seq
330 aa
AA seq
DB search
MSVSEFLKPRIVNVEQINSYIAKVTLEPLERGFGHTLGNALRRILLSSMPGCAIIEAQIN
QVLHEYTAKDGVQEDITEILLNLKGVAVKLHGRNEVTLILNSKGPGKITAGDIELEHDVE
IVNPDHVVAHLTHSGEINIIMKAARGRGYQPASTRLTEEDQSIGRLVLDASFSPIRRVAY
EVDSARVEQRTDLDKLIIEIETNGTISPDEAIRKAATILQDQLTAFVELENKVKGSKEEK
MLQVDPILLQPIDDLELTVRSVNCLKAENIYYVGDLIQRTEVGLLKTPNLGKKSLTEIKD
VLASRGLSLGTRLDNWPPTEIQSDTRASSV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtatctgagtttcttaaacctaggatagtaaatgttgagcaaatcaatagctat
atagctaaagttacgctagaaccgctagagcgtggatttgggcatacacttgggaatgct
ctacgccgaattttgctgtcatcaatgccaggttgtgctattatcgaagcacaaattaat
caagtactgcatgaatatactgctaaggatggagtacaggaagatataacagaaattttg
cttaacctgaaaggggttgcagttaagctacatgggcgtaatgaggttactttaatatta
aatagtaaaggtcccggaaagataacagcgggagatatagaacttgagcatgatgtagag
attgttaatccagatcacgtggtggctcatcttacacattctggtgagattaatattatt
atgaaagctgcccgtggccgaggttatcagccggcttcaacgcggcttacagaagaagat
cagtctattgggcgattagttcttgatgcctcctttagtcctattcgtagagtagcctat
gaagtggatagcgctcgtgttgagcaacgaactgatttagataagttaattatagagatt
gaaacaaacggtacaatatccccggatgaagcaatacgaaaagcggcaacaatcctacaa
gatcaattgacggcttttgttgaactagaaaataaagtaaaaggatctaaagaggaaaaa
atgctccaggttgatcctatactgttacaaccaatagatgatttagagctgacagtgcga
tcagtaaattgtctaaaagcagaaaatatttattatgttggagatcttattcaacgaaca
gaagttggattgttaaagacgccaaatttaggaaagaagtcgctgacagagattaaagat
gtgctagcttcgcgaggactctctttagggacacgtctagataactggccacctacagag
atacaaagtgatactagggcatcttctgtttaa
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