Nitratireductor thuwali: NTH_02252
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Entry
NTH_02252 CDS
T09967
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ntu
Nitratireductor thuwali
Pathway
ntu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ntu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NTH_02252 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntu03019
]
NTH_02252 (pnp)
03016 Transfer RNA biogenesis [BR:
ntu03016
]
NTH_02252 (pnp)
Enzymes [BR:
ntu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NTH_02252 (pnp)
Messenger RNA biogenesis [BR:
ntu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NTH_02252 (pnp)
Transfer RNA biogenesis [BR:
ntu03016
]
Prokaryotic type
tRNA degradation factors
NTH_02252 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
UUP17777
LinkDB
All DBs
Position
complement(2287836..2289983)
Genome browser
AA seq
715 aa
AA seq
DB search
MFKHHKVEIEWGGRPLTLETGKIARQADAAVLATYGETVVLATVVSAKEPKPGLDFFPLT
VNYQEKTFAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFVNGYKNDTQVVLTVLQH
DLENDPDVVAMVAASAALTLSGVPFMGPIGAVRVGYIGGEYVLNPHVDEMEETQLDLIVA
GTQDAVLMVESEAKELAEDIMLGAVMFGHKQFQPVIDAVIKLAEVAAKEPREFLPEDLSA
LEGEMLKIVEDDLRAAYKIIDKQDRYAAVDAAKAKVKETFLPETEEERKWSAEQVGTVFK
ALQAKIVRWNILDTGSRIDGRDLKTVRQIVAEAGVLPRTHGSAVFTRGETQALVVATLGT
GEDEQFVDALTGTYKESFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPVLPAA
DQFPYTIRVVSEITESNGSSSMATVCGTSLALMDAGVPLSKPVAGIAMGLIKEDDRFAVL
SDILGDEDHLGDMDFKVAGTNEGITSLQMDIKIQGITEEIMQVALDQAKGGRLHILGEMS
KALSESRGELGEFAPRIEVMQIPTDKIRDVIGTGGKIIREIVEKTGAKINIDDDGTVKIA
SSNAKEIEAARKWIHSITAEPEVGEIYEGTVVKTADFGAFVNFFGPKDGLVHISQLAPER
VQKTTDVVKEGDKVFVKLMGFDERGKVRLSMKVVDQETGQEIAREKKDEKEEAEG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaacatcataaagtggaaatcgagtggggtggccgtccgcttacccttgaaacg
ggcaagatcgcccgtcaggccgatgccgccgtgctcgcgacctacggcgaaacggtcgtt
ctggccaccgtcgtttcggcgaaggagccgaagccgggcctcgactttttcccgctgacc
gtcaattaccaggaaaagacctttgccgccggcaagatccccggcggcttcttcaagcgc
gaagggcgcccgagcgaaaaggaaacgctcacctcgcggctgatcgatcggccgatccgc
ccgctcttcgtcaacggctacaagaacgacacccaggtcgtcctgacggttctccagcac
gatctggaaaatgacccggacgtcgtggccatggtcgctgcttccgccgcgctcacgctt
tccggtgttccgttcatgggcccgatcggcgcggtgcgcgtcggatatatcggcggcgaa
tacgtgctcaacccgcatgtcgacgagatggaagagacccagctcgacctcatcgtcgcc
ggcacccaggacgccgtgctgatggtggagtcggaagcgaaggaactcgccgaggacatc
atgctgggcgccgtcatgttcggccacaagcagttccagcctgtcatcgacgccgtcatc
aagctggcggaagtcgccgccaaggagccgcgcgaattcctgccggaagatctttcggcg
ctggaaggcgaaatgctcaagatcgtcgaggacgatctgcgcgccgcctacaagatcatc
gacaaacaggatcgttatgctgccgtggatgccgccaaggcaaaggtgaaggagaccttc
cttcccgagaccgaggaagagcgcaaatggtcggccgagcaggtcggcaccgtgttcaag
gcgctgcaggccaagatcgtgcgctggaacattctcgacaccggcagccgcatcgatggc
cgcgacctgaagacggttcgccagatcgtcgccgaagcaggcgtcctgccgcgcacccat
ggctcggccgtgttcacccgcggcgagacccaggcgctggtcgtggccacgctgggaacg
ggcgaggatgagcagttcgtcgacgcgctgaccggcacctacaaagaatccttcatgctg
cattacaatttcccgccctattcggtgggagagacgggccgcatgggttcgccgggacgt
cgcgaaatcggccatggcaaactcgcctggcgcgccattcatccggtccttccggccgca
gaccagttcccctacacgatccgcgtggtatcggagatcaccgagtccaacggctcgtcc
tccatggcaacggtctgcggaacgtcgctggcgctgatggatgcgggcgttccgctttcc
aagccggtcgccggcatcgccatgggcctcatcaaggaagacgatcgctttgcggtcctg
tccgacattctcggcgacgaggatcacctcggcgatatggacttcaaggtggccggcacc
aatgaaggcatcacctcgctgcagatggacatcaagatccagggcatcaccgaggagatc
atgcaggttgcgctcgaccaggccaagggcggccgcctgcacattctcggcgagatgtcc
aaggcgctttcggaaagccgcggcgaactcggcgaattcgctccgcgcatcgaggtcatg
cagatcccgaccgacaagatccgcgacgtcatcggcacgggcggcaagatcatccgcgag
atcgtcgaaaagaccggcgccaagatcaacatcgacgacgacggcacggtgaagatcgct
tcctccaatgccaaggagatcgaggcggccaggaagtggatccactccatcacggccgag
ccggaagtgggcgagatctacgagggcacggtcgtcaagaccgccgacttcggcgccttc
gtcaacttcttcggtcccaaggacggcctcgtccacatctcgcaactggcacccgagcgg
gtccagaagaccaccgacgtcgtcaaggaaggcgacaaggtcttcgtcaagctcatgggc
tttgacgagcgcggcaaggtgcgcctgtcgatgaaggtcgtggaccaggagaccggtcag
gagatcgcgcgcgagaagaaggacgagaaggaagaagccgaaggctga
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