Nitratireductor thuwali: NTH_03913
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Entry
NTH_03913 CDS
T09967
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ntu
Nitratireductor thuwali
Pathway
ntu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ntu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NTH_03913 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ntu03021
]
NTH_03913 (rpoA)
03400 DNA repair and recombination proteins [BR:
ntu03400
]
NTH_03913 (rpoA)
Enzymes [BR:
ntu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NTH_03913 (rpoA)
Transcription machinery [BR:
ntu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NTH_03913 (rpoA)
DNA repair and recombination proteins [BR:
ntu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NTH_03913 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
UUP19410
LinkDB
All DBs
Position
4013106..4014116
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKIEFTSKGKTQTTLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIGMEGDGPKRMVVRKQGPGAVTAGDIQTVG
DVEILNPEHVICTLDEGAEIRMEFTVDTGKGYVPADRNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLTMTLETDGSVTGEDAVAFAARILQDQLGLFVNFEEPQKEQPA
EQVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPDWPPDNIEELAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaaaaactggcaagaactcatcaagccgaacaagatcgagttcacgtccaaa
ggtaagacccagaccacgctcgtcgccgagccgctggagcgcggcttcggcctgacgctc
ggcaacgcgctgcgccgcgtgctcctgtcgtcgctgcgcggcgccgccgtgaccgccgtg
cagatcgacggcgtgctgcacgagttctcgtcgatccccggcgtgcgtgaggacgtgacc
gacatcgttctcaacatcaaggaaatcgccatcggcatggagggcgacggacccaagcgc
atggtcgtgcgcaagcagggaccgggcgccgtgaccgccggcgacatccagaccgtcggc
gacgtcgagatcctgaaccccgagcatgtgatctgcaccctcgacgagggcgccgaaatc
cgcatggagttcaccgtcgacacgggcaagggctatgtgccggccgaccgcaaccgcgcc
gaggatgcgccgatcggcctgatcccggttgacagcctctattcgccggtcaagaaggtc
tcctacaaggtcgagaacacccgcgagggccaggttctcgactacgacaagctgaccatg
acgctggagaccgacggttcggtgaccggtgaggacgcggtggctttcgctgcccgcatc
ctgcaggatcagcttggcctgttcgtgaatttcgaggagccgcagaaggagcagcctgcc
gagcaggtgacggagctcgccttcaacccggcgcttctgaaaaaggtcgacgagctggag
ctttcggtccgctcggccaactgcctgaagaacgacaacatcgtctatatcggcgacctt
atccagaagacggaagccgagatgctgcggacgccgaatttcggccgcaagtcgctcaac
gaaatcaaggaagtgctggcatcgatggggctgcacctcggcatggaagtgccggattgg
ccgcctgacaacatcgaagaactcgccaagcgctacgaagatcagtattag
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