Niallia taxi: NQZ71_00145
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Entry
NQZ71_00145 CDS
T09453
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ntx
Niallia taxi
Brite
KEGG Orthology (KO) [BR:
ntx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ntx03009
]
NQZ71_00145 (rlmD)
Enzymes [BR:
ntx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NQZ71_00145 (rlmD)
Ribosome biogenesis [BR:
ntx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NQZ71_00145 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Met_10
Methyltransf_25
PrmA
Methyltransf_15
MTS
RrnaAD
Cons_hypoth95
Methyltransf_11
Methyltransf_4
TPMT
Methyltransf_23
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
WOD62877
LinkDB
All DBs
Position
complement(32296..33666)
Genome browser
AA seq
456 aa
AA seq
DB search
MSRTLPVQKNDILDIVFEDLTHEGSGVAKVEGYPLFIPNGLPGEKAKVKVVKTNKNFGFG
RLLELQEKSPYRVEAPCPIYKECGGCQLQHLNYEGQLLVKHKHVQDVLERIGKIDAVVHP
TIGMKEPWRYRNKAQVPIGEQEGGLIGGFYQQRSHQIINMEACLIQQEENDDVVRKVKEI
CQKYGVKAYNEERHKGELRHIMVRRGLVTGEMMIVLITRTNEITNKNKVVDEIATEISGL
KSIIHNVNNKKTNVIMGDITNVLWGQETITDYIGDVKFAISARSFYQVNPEQTKVLYDKA
LEYANLQGEENVIDAYCGIGTISLFLAKKAKKVFGVEIVPQAIEDAGKNALLNDIHNVDF
AVGKAEEVIPNWYKEGNTADVLVVDPPRKGCDEALLQTIIDMKPKKVVYVSCNPATLARD
LRVLEDGGYKTLEVQPVDMFPQTMHVEAVAQLVLTV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaacattgcccgttcaaaagaacgatatattagatatagtatttgaagatttg
acacatgaaggttctggcgtagcgaaggttgaaggttatccactgtttatccccaatgga
cttccaggggaaaaagcgaaggttaaagtcgtgaaaactaataaaaattttgggtttggc
cgtttgcttgaattgcaggaaaaaagcccatatcgagtggaagcaccatgtccaatttat
aaagaatgcggaggctgtcagcttcagcatcttaactatgaaggtcagctccttgtaaag
cataagcatgttcaggatgtccttgaaagaatcggaaaaatcgatgctgtagttcacccg
acaatcggaatgaaagagccatggcgttatcgcaacaaggctcaggtgccaattggagag
caggagggcggtctgataggaggtttctatcaacagcgcagccaccaaattattaatatg
gaagcctgccttatacaacaagaagaaaatgatgatgtcgtaagaaaagtaaaagagatc
tgtcaaaagtacggagtaaaggcatacaatgaggagcgccataaaggagagcttcgtcat
atcatggttcgccgtggtttagttacaggtgaaatgatgattgtgcttattacgagaaca
aacgaaattacaaacaaaaataaagttgtggatgaaattgcaacagagatttccggttta
aaatcaattatccacaatgtgaataacaaaaaaacaaatgtcattatgggcgacataaca
aatgtattgtggggacaagaaacaattactgattatattggagatgtgaagttcgctatt
tcagcccgctctttctatcaagtaaatccagaacagacaaaggttttatatgataaagca
ctagagtatgctaatttgcaaggcgaagaaaacgttattgatgcttattgtggtattggc
acgatttctctgttcctcgcgaaaaaagcaaaaaaggtgtttggagtagaaattgttcca
caagcaatcgaagacgctggcaaaaatgcactcctaaatgatatccacaatgtggatttt
gctgtcggtaaagcagaagaagttatccccaactggtataaagaaggaaacacagcagat
gttctagttgttgatccgccaagaaaaggctgtgatgaagccctattacaaacaatcatt
gacatgaagccaaaaaaagtcgtgtatgtttcctgcaacccagcaacattagcaagagac
ctgcgcgttcttgaagacggcggctacaaaacacttgaagtacagcctgtggatatgttc
ccgcagacaatgcatgttgaggctgtagctcagttggtattaacagtgtaa
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