Niallia taxi: NQZ71_01660
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Entry
NQZ71_01660 CDS
T09453
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ntx
Niallia taxi
Pathway
ntx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ntx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NQZ71_01660 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ntx03021
]
NQZ71_01660 (rpoC)
03400 DNA repair and recombination proteins [BR:
ntx03400
]
NQZ71_01660 (rpoC)
Enzymes [BR:
ntx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NQZ71_01660 (rpoC)
Transcription machinery [BR:
ntx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NQZ71_01660 (rpoC)
DNA repair and recombination proteins [BR:
ntx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NQZ71_01660 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WOD63128
LinkDB
All DBs
Position
complement(319454..323053)
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEFMKIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDSGDTALEKKQLLSEKEYRAYRDKYGVKFQASMGAEAIKKLLS
DIDLNKDVEGLKEELKTAQGQRRTRAIKRLEVLEAFRGSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPRE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREDSVGEGMIFNDTSEALLAYQNGYVHLHTRVAVR
ASSLNNQTFTEEQNSQLLLTTVGKLVFNEILPESFPYINEPTKSNLEEKTPERFFVEQGT
DVRAAIQAMPIIEPFKKKILGNIIAEVFKRFKITETSKMLDRMKDLGFRHSTKAGITVGV
ADIVVLGEKQEIIDEAQGKVDNVMKQFRRGLITEEERYDRVISIWSAAKDVIQAKLMKSL
DIRNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIISSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVRDDDCGTDRGLLVAALKEGTEIIEPLD
ERLIGRYARRAIKHPETKAVIVAENELITEDLAVEIVEADIKEVWIRSAFTCNTRHGVCK
KCYGRNLATGQEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVITEMAGVVVGINEGRDRQHEIVVQGELETRTYTAPYTARLKVKIDDVVEQ
GQELTEGSIDPKELIKVKNVTAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
VDAGETEVLPGTLLDIHQFTDANAKALREGKLPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMPRYRNAEPITVAETTEESVSVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgttggatgtaaataattttgaattcatgaaaatcggtttagcttcaccagataaaatc
cgttcatggtcatttggtgaggtaaaaaaacctgaaacaattaactatagaactttaaaa
ccagaaaaagacggcttattctgtgagcgtatttttggtcctacaaaagactgggaatgt
cattgtgggaaatacaagcgtgtaagatataaaggtgtagtttgtgaccgctgcggagta
gaagtaactcgtgcaaaagtgcgtcgtgaacgtatgggtcatatcgaattagcagctcct
gtatctcacatatggtacttcaaaggaattccgagccgcatgggtcttgttttagatatg
tcaccacgtgctttagaagaagttatttactttgcttcatatgtagtaactgattcaggt
gatactgcacttgaaaagaaacagcttctttcagagaaagagtaccgtgcataccgagat
aagtatggtgttaagttccaagcatccatgggtgctgaagctatcaaaaagcttctttct
gacatcgatttaaacaaagatgtagaaggtttaaaagaagaattgaaaacagcacaaggt
caacgccgtactcgtgcaattaaaagattggaagttcttgaagcattccgtggttcaggt
aatgagccttcatggatgattttagatgttcttcctgtcattcctccagaattacgacca
atggttcaattggatggtggacgttttgcaacatcagatctaaatgacctataccgtcgt
gtaattaaccgtaacaatcgtctgaaaagactattggatttaggtgctccaagtatcatt
gtgcaaaacgaaaagcgtatgcttcaagaagcagtagatgcgcttatcgacaatggtcgt
cgtggccgtcctgttacaggtccagggaacagaccgcttaaatcactttctcacatgctt
aaagggaaacaaggtcgtttccgtcaaaacttgcttggtaaacgtgttgactactcaggt
cgttcagttatcgtagttggaccaaacttgaaaatgtatcaatgtggacttccaagagaa
atggcgttagagctatttaagcctttcgttatgaaggaattggttgaaaaaggtttggcg
cataacattaaatctgctaagcgcaaaattgaaagagttcaaccagaagtatgggatgtc
ttagaagaagttatcagagagcatccagtattgcttaaccgtgcaccgactttgcacaga
ctaggtatccaagcgtttgaaccaacactagtagaaggtcgcgctatccgtttgcatcca
cttgtttgtacagcttataacgctgacttcgatggtgaccaaatggctgtccatgttcca
ttgtcttccgaagcacaagctgaggctagattgctaatgcttgctgctcagaacatcttg
aaccctaaggatggaaaaccagttgttacgccgtcacaggatatggttcttggtaactac
tacttgacacttgaaagagaagactctgttggtgaaggtatgatcttcaatgatacgagt
gaggcattattggcataccaaaatggttatgttcatttgcatactcgtgttgctgtgcgt
gcaagttctttgaataaccaaacattcacagaagaacaaaacagccagcttcttttgaca
actgtagggaaattagtattcaacgaaattcttcctgaatctttcccgtacattaacgaa
ccaacaaaatctaatcttgaagaaaaaactccagaaagattctttgtggagcaaggtaca
gatgtacgtgcagctattcaagctatgccaatcattgagccattcaagaagaaaatactt
ggaaatatcatcgctgaagtgttcaagcgattcaaaatcactgaaacttctaagatgctt
gatagaatgaaggatcttggctttagacactcaacaaaagcaggtattactgttggtgtt
gcggatatcgtggttcttggagaaaaacaagaaattattgatgaagcacaaggtaaagta
gataatgttatgaagcaattcagacgtggtctaatcacagaagaagagcgttatgacaga
gtaatctctatctggagtgctgctaaggatgtcatccaagcgaaactaatgaagtcattg
gatatacgaaacccaatcttcatgatgagtgattccggtgcccgtggtaacgcatctaac
tttacacagcttgcaggtatgcgcggattgatggccaacccggctggtagaatcatcgag
ttacctatcatctcaagtttccgtgagggattaacagtattggaatacttcatctctaca
catggtgctcgtaaaggtcttgccgatacagcactaaaaacagccgattcgggttacttg
actcgccgtcttgttgacgttgctcaggatgtcattgtacgtgatgatgactgtggaact
gacagaggattgcttgttgcagctcttaaagaaggcacagaaattattgagccattggat
gagcgtttaattggacgttatgcaagaagagcaattaaacacccagaaacaaaagcagtt
attgtggcagaaaacgaacttattacagaagatcttgctgttgaaatcgtagaagctgac
attaaagaagtgtggattcgttctgcgtttacatgtaacactcgccatggtgtatgtaaa
aaatgttacggacgtaaccttgcaactggtcaagaagttgaagttggtgaagcagttggt
attatcgctgcccaatctatcggtgagccaggaacacagttaacgatgcgtactttccat
acaggtggggttgctggagacgatatcacacagggtctacctcgtattcaggaaattttt
gaagcacgtaacccaaaaggtcaggctgtaattacagagatggcaggggttgttgtcgga
atcaacgaaggaagagaccgtcagcatgaaatcgtggttcaaggagaacttgaaacaaga
acttacacagcgccttatactgctagacttaaagttaagatagatgatgtagtagaacaa
gggcaagaattgactgagggttcaatagatccaaaagaattgatcaaagtgaagaacgtt
actgctgtacaggaatatcttcttcgtgaagtgcaaaaggtttatcgtatgcagggtgtt
gaaatcggggataaacacgttgaagtaatggtgcgccaaatgcttcgaaaagtgcgtgta
gttgatgctggtgaaacagaagtactaccaggaacactactagatatccaccaatttact
gatgcaaatgcgaaagctttaagagaaggcaaattgcctgcaactggaagaccagtattg
ttaggtataacaaaagcatctcttgaaactgattcattcctatctgcagcttcattccaa
gaaactacaagagttcttacagatgctgctattaaaggtaaacgtgatgaactgcttgga
ctgaaagaaaatgttatcattggtaaactagttccagctggaacaggtatgccaagatac
cgcaatgcagagccaattacagtggctgaaacaacagaagaatccgtttcagtagaataa
DBGET
integrated database retrieval system
