Niallia taxi: NQZ71_06690
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Entry
NQZ71_06690 CDS
T09453
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ntx
Niallia taxi
Brite
KEGG Orthology (KO) [BR:
ntx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ntx03016
]
NQZ71_06690 (thpR)
Enzymes [BR:
ntx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
NQZ71_06690 (thpR)
Transfer RNA biogenesis [BR:
ntx03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
NQZ71_06690 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
DUF1045
Motif
Other DBs
NCBI-ProteinID:
WOD64013
LinkDB
All DBs
Position
1356494..1357057
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AA seq
187 aa
AA seq
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MTMNTHYFLAIGLPEAARQQIEDKKAMLQAAFPFKKWVHPQDYHLTLAFLGNAPEEQRSE
LTAILDNALYNTEKFTLNIDKLGVFGNEASPRIFWLGVDENPSLFRLQENVYAYCKQAGF
TLEKRPFHPHMTLARKWAGQERFQADRLALESPFTEEMVSLDVSQFSLFQTHLNKEPKYE
AIYTKKL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgaatacacattattttttagcaataggcttgccggaagctgccagacaacag
attgaagataaaaaagcaatgcttcaagcagcatttccctttaaaaaatgggtgcatcca
caagattaccatttaacgttagcttttttaggtaatgcgcctgaggaacagagaagtgag
cttacggcaattttggataatgctttgtataatacagagaaattcactttaaatatcgat
aaattaggtgtatttggaaacgaagcaagtccgcggattttctggcttggagtggacgag
aatccatctctattcaggctgcaagagaatgtgtatgcgtattgcaagcaagctggcttt
acattagaaaaaaggccattccatccgcatatgacccttgcaaggaaatgggctggacaa
gagaggtttcaagcagacaggcttgctttagaatctccattcacggaagaaatggtttcg
cttgatgtaagtcaattttcattatttcaaacacatttaaataaagaacctaaatatgaa
gcaatatatacaaaaaaattataa
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