Niallia taxi: NQZ71_08305
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Entry
NQZ71_08305 CDS
T09453
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ntx
Niallia taxi
Brite
KEGG Orthology (KO) [BR:
ntx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntx03019
]
NQZ71_08305
03009 Ribosome biogenesis [BR:
ntx03009
]
NQZ71_08305
Enzymes [BR:
ntx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NQZ71_08305
Messenger RNA biogenesis [BR:
ntx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQZ71_08305
Ribosome biogenesis [BR:
ntx03009
]
Prokaryotic type
rRNA helicases
NQZ71_08305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Flavi_DEAD
NAT10_TcmA_helicase
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
WOD64314
LinkDB
All DBs
Position
1697590..1698900
Genome browser
AA seq
436 aa
AA seq
DB search
MSKTKFNKYELQPFILNAVDELGFYEPTEIQQKVIPLILKGESAIGQSQTGTGKTHSYVL
PIVQKIVSQESTVQAVITAPTRELATQIHQEILKITKHAPEAITSRLFIGGTDKQRAIEK
LKSQPHIVVGTPGRINDLVKEQALFVHTASMLIVDEADLMLDMGFIEDVDQIAARMPKNL
SIFVFSATIPEKLKPFLKKYLENPKYVHVEPKQLTAAKIEHVLLPSRHRDKVATVYEALT
TFNPFLAIVFTNTKQMCDEVASGLSRKGLKVARLHGGLTPRERKKVMKQILDLEYQYIIA
TDLAARGIDIKGISHVINYELPSDLDFYVHRVGRTARAGSSGIALTIYEQADEDKLNQLE
KLGIEFKNIDLKNGEWVEIEDRNRRKKRQRSADEIDAKAKSLVKKPNKVKPGYKKKMQRQ
VESIKKRERRLKSRNK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacaaaatttaataaatacgaattacagccgttcatcctgaacgcagtcgat
gagcttggcttttatgaaccaactgaaatacagcaaaaggtaattccattaattttaaaa
ggcgaaagtgcgattggacaatctcaaacaggaacaggtaaaacccattcctacgtactg
ccaattgtccaaaaaattgtttcacaggaaagtactgtgcaagctgttatcactgcacca
acaagggagcttgcaacacagattcatcaggaaattcttaaaatcacaaaacacgcgcca
gaggctattacttcccgtttgttcatcggaggaacggataaacagcgcgcgattgaaaag
ctgaaaagccagccccatattgttgtaggaacaccgggtagaatcaatgatcttgtgaaa
gagcaagccttgtttgttcatacagcatcaatgctaatcgtcgatgaagcagacttaatg
cttgatatgggcttcatagaagacgtggaccaaattgctgcaagaatgccgaagaatttg
agcatctttgttttctccgcaacaattccggaaaagctaaagccattcttgaaaaaatat
ttggaaaatcctaaatatgttcatgtcgagccaaaacagctaactgcagcaaaaattgaa
catgtacttcttccttcaaggcatagagacaaggttgcgacagtatatgaggcgttaact
acttttaacccatttttggcaatcgtgttcacgaatacgaagcaaatgtgtgacgaggta
gcatcaggcctttctcgaaaagggcttaaggttgctagacttcatggaggcttaacacct
cgcgaacgtaaaaaagtcatgaagcaaatcttagatctagaatatcaatatattattgca
actgatttagctgcaagaggaattgacattaaaggaatcagccatgtcatcaactatgag
ctgccatctgatttagatttttatgttcaccgtgttggaagaacggcaagagctggttct
tcaggtatcgcattgacgatttacgaacaagcggatgaggataagctgaatcagcttgaa
aagcttggcattgaatttaaaaacatcgatttgaaaaacggtgagtgggtcgaaattgaa
gatagaaaccgccgtaaaaaacgtcaacgctcagcagatgaaattgatgcgaaagcaaaa
tcacttgtgaaaaagccaaataaagtaaaaccaggctacaagaaaaaaatgcagcgtcaa
gtggaaagcatcaagaagcgtgaaagacgtctgaaaagccgaaacaaataa
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