Niallia taxi: NQZ71_10070
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Entry
NQZ71_10070 CDS
T09453
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ntx
Niallia taxi
Pathway
ntx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ntx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQZ71_10070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntx03019
]
NQZ71_10070
03009 Ribosome biogenesis [BR:
ntx03009
]
NQZ71_10070
Enzymes [BR:
ntx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NQZ71_10070
Messenger RNA biogenesis [BR:
ntx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQZ71_10070
Ribosome biogenesis [BR:
ntx03009
]
Prokaryotic type
rRNA helicases
NQZ71_10070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_22
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
WOD61184
LinkDB
All DBs
Position
2029694..2031160
Genome browser
AA seq
488 aa
AA seq
DB search
MTTFSDFNLSSSLEKALSNMGFEEPTPIQAQAIPIGLAGKDMIGQAQTGTGKTTAFGVPL
LEKIEVGKAVQGLVIAPTRELAVQVAEELNRIGAVKGIRTLPIYGGQDINRQIRGLKKKP
EIIAATPGRLIDHIERKTIRLQDTKMIVLDEADEMLNMGFIEDIERILSETPKTRQTLLF
SATMPKRIQSLAERFMVEPELVKVKAKEMTVTNIEQHFIELQERQKFDVLCSLLDIQSPD
LAIVFGRTKKRVDEVVEGLIKRGYSAEGIHGDIPQGKRDQVIRRFKEQTIDIMVATDVAA
RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGYAVTFVSPREVDHLRIIENVTKK
KMVKNPIPSTTDVLAGNQQATINKIQKTVEENQFAEYKRLAETLLEETDSVTLLASALKL
LTKEPDATPVRLTAVEPLRSKKPKGDRSGGGGRRRSGDRGGRGYDRNRGGGNGGGGERRS
RNRNRTRD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
ttgacgactttttcagattttaatttaagcagcagtttagaaaaagcattatccaatatg
ggttttgaagagccaacaccaattcaagcacaggcgattccgattggtcttgcaggtaaa
gatatgattggacaggcacaaacaggaacaggtaaaacaacagcattcggtgttccactt
ttggaaaaaatcgaagttggtaaagctgttcaaggtcttgttatcgctccaactagagaa
ttggctgtacaggttgcagaagaacttaaccgtatcggtgcagtaaaaggtatccgtaca
ttgccaatttatggtggacaagatattaaccgccaaattcgtggtttaaagaaaaagcca
gaaattattgcggcaactcctggacgtcttatcgaccatattgaaagaaaaacaattcgt
ttgcaagatacaaaaatgatcgttttggatgaagcagatgaaatgctaaatatgggcttc
atcgaagatatcgaaagaatcttgagtgaaacaccaaaaacacgtcaaactttacttttc
tcagcaacaatgccaaaaagaattcaatcattggcagagcgcttcatggtggagccagag
cttgttaaggttaaagcgaaagaaatgactgttacaaatattgaacaacactttatcgag
ctgcaagaacgccaaaagtttgatgtactatgcagtcttcttgatatccaatcaccagat
cttgcgattgtattcggaagaacgaaaaaacgtgttgatgaagtagttgaaggattaatc
aaacgtggatattctgctgaaggaatccatggtgatattcctcaaggtaaaagggatcaa
gtaatccgtcgcttcaaggagcaaacaattgatatcatggtagcaacagatgtagctgcc
cgcggattggatattagcggtgtaacacatgtttacaactttgatattccacaagatcca
gaaagctatgttcaccgaattggtcgtactggccgtgctggtaaaaaaggttatgctgta
acatttgtatctccaagagaagtagatcaccttcgcatcattgaaaatgtaacgaagaaa
aaaatggttaaaaacccaattccatcaactacagatgtattggcaggaaaccaacaggca
acaatcaacaaaatccaaaaaacggttgaagagaatcaattcgcagaatacaagcgtctt
gcagaaactttactggaagaaacggattctgttacattgcttgcaagtgcattaaaactt
cttacaaaagagccggatgcaacgccagttagattgactgctgttgaaccgcttcgttct
aaaaagccaaaaggtgaccgttctggcggcggcggacgtcgtcgtagtggtgacagaggc
ggacgcggatatgatcgcaaccgtggcggcggcaacggcggcggcggagaaagaagaagc
agaaacagaaatagaactagagactaa
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