Niallia taxi: NQZ71_12150
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Entry
NQZ71_12150 CDS
T09453
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ntx
Niallia taxi
Pathway
ntx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ntx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NQZ71_12150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntx03400
]
NQZ71_12150
Enzymes [BR:
ntx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NQZ71_12150
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NQZ71_12150
DNA repair and recombination proteins [BR:
ntx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NQZ71_12150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF1631
Motif
Other DBs
NCBI-ProteinID:
WOD61573
LinkDB
All DBs
Position
complement(2442674..2443483)
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AA seq
269 aa
AA seq
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MPELPEMENYKRNLNQLLQNKMITDVIINREKSVNVAPILFIGAVRGTTIQAVERRAKHL
LFRLSNNKVLLLHLMLGGWMYYSEEKDKPKRTVQVQLSFGEKHLYFIGLRLGYLHLYTEQ
EVEQELADLGPEPLDASFTEEQFLSYIEKKRGMLKLKLVDQHFLSGIGNCYSDEICYDAR
LLPESKLEDLSGDERSALYTSIRTVLPEATEIGGYMEHPLFVGDTKTGAYNDKCRVYDCE
GQSCQRCGSKIVKTEISSKKTFFCPVCQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaaatggaaaattacaaacgcaacctaaatcagctcctgcaaaat
aagatgattacagatgtcatcataaacagagaaaaatcggttaatgtcgcaccaatttta
tttattggcgccgttcgcggtactaccatacaagctgttgagaggcgggcaaagcatctg
ttgtttcggttaagcaataataaggtgctgctgctgcatttaatgcttggggggtggatg
tattattcagaagaaaaggataagccgaaacgaacagtgcaggtgcagctttcctttgga
gaaaaacatctctatttcatcggtttaagactcggataccttcatctgtacactgaacaa
gaagtggagcaggaattggcagatttaggaccagagccattagatgccagctttacggaa
gaacagtttttaagctatatagaaaaaaagcggggcatgttgaagctaaagctggtcgat
cagcattttttgtcaggaatcggcaattgttattctgacgaaatatgttatgatgcaagg
ctgttaccggaaagtaaattggaggatttaagtggggacgagcgttcggctctctataca
tcgattcgaacagtattaccagaggcaacagaaattggcgggtatatggagcatcctctt
ttcgtcggagatactaaaacaggagcttataatgataaatgccgtgtgtatgactgtgaa
ggtcaatcttgtcaaagatgtggcagtaaaattgtgaaaactgaaatctcttccaagaaa
accttcttttgtccagtttgtcagcattaa
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