Niallia taxi: NQZ71_12540
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Entry
NQZ71_12540 CDS
T09453
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ntx
Niallia taxi
Pathway
ntx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ntx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQZ71_12540 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntx03019
]
NQZ71_12540 (recQ)
03400 DNA repair and recombination proteins [BR:
ntx03400
]
NQZ71_12540 (recQ)
Enzymes [BR:
ntx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NQZ71_12540 (recQ)
Messenger RNA biogenesis [BR:
ntx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQZ71_12540 (recQ)
DNA repair and recombination proteins [BR:
ntx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NQZ71_12540 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WOD61648
LinkDB
All DBs
Position
complement(2527353..2529500)
Genome browser
AA seq
715 aa
AA seq
DB search
MFEKALSVLKEYFGYDTFRLGQEEVIRQILQGDNVACIMPTGGGKSICYQVPAMIFPGVT
LVVSPLISLMKDQVDSLTEAGIPATFLNSTLDSFEASKRMEDLKRGKYKILYVAPERLDG
DFFIDLLNDLEIRFIAIDEAHCISQWGHDFRPSYSRLGQLIRRLEKRPIVAALTATATPV
VKEDICAQLEIPVENTVITGFERDNLSFSVVKGEDRHRYIEGFLKNNKEESGIIYAATRQ
DVERLYDRLTNKGFLVAKYHGGMSDKAREEQQQKFINDDYQLMIATTAFGMGIDKSNIRF
VIHYQLPKNMEGYYQEAGRAGRDGLPSECILLYSAQDIRIQRFLIDQTTHDSAKQEQDLA
KLQAMINFCHTEDCLQKYILHYFGEQTEQKCGRCSNCKDERHVVDVTVDAQKVLSCMMRM
GERFGKTMVAQVLTGSKNKKIIDFSLDKVKTYGIMKEQSAKDVSDFIEFLISENYIAVSS
GSMPILKVAPTGKEVLLQRKQVLRKEQAIAKVIVEDNDLFQRLRMMRKSLADSEGVPPFV
IFSDQTLKLISSQKPGNEEELSNIKGIGDHKLQKYGGIILETLQSYKQENPEDWENKQEV
SSTDTSMLPKKKQKTENSHLVSLELLQAGLDIKQIAEKRAMTPITIENHLLRCDEEGEVI
NWSQFLSLDDQQQIEEVLEQGETDKLKPIKEQLPAHISYFQIKIALVLFARKQKI
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaaagcattatcggtattaaaggagtattttggatatgatacctttagacta
gggcaagaggaagtaatacggcaaattctgcaaggagataacgtagcttgtattatgccg
acaggtggagggaaatcaatctgctatcaagtaccagcgatgatattcccaggtgtaacg
ctcgttgtttcaccccttatctccttgatgaaggatcaggtcgattctttaacagaagca
ggtattcctgcaacctttctgaacagtacattggattcctttgaagcttccaaaagaatg
gaagatttgaagagggggaaatataaaattttatatgttgctccagaaagattagatggg
gactttttcattgatttgctgaatgacctcgagattcgattcatagcaattgatgaagcc
cactgtatttcccaatggggacatgattttcgtccaagctattcaagattagggcaatta
atcagaaggcttgagaaacggccgattgtggctgcactaactgctacagcaacccctgtt
gttaaagaggacatttgtgcacaactagaaatacctgttgaaaatacagtcataactggg
tttgaacgagataatttatccttctctgtcgtcaaaggggaagatagacatcgatatatt
gaaggatttctaaaaaacaataaagaagaatcgggaattatttatgctgcgacaagacag
gatgtcgaaaggctttatgaccgtttaacgaataaaggttttctcgtggctaaatatcat
ggtggaatgagtgacaaagcaagagaggaacagcaacaaaaatttattaatgacgattat
caattgatgatagctacaacagcctttggtatggggattgataaaagtaatattcggttc
gtcattcattatcagctcccgaaaaatatggaaggctactatcaggaagctggccgtgcc
ggcagggatggacttccaagtgaatgtattcttttatattctgcacaggatatccgtatt
cagcggtttctcattgatcagacaacacatgattccgctaaacaggagcaggatttggct
aagctgcaggcaatgattaatttttgtcatacagaggattgcctccaaaaatatattctt
cactattttggggagcaaacagagcagaaatgcggaagatgcagcaactgtaaggatgaa
agacatgttgttgatgtgacagttgatgcccaaaaagtactttcctgtatgatgcgtatg
ggcgaaagatttggaaaaacaatggtcgcccaagtgttgacaggctccaaaaacaaaaag
ataatcgacttttccttagataaagtaaaaacatatggaattatgaaggaacagtctgct
aaagacgttagtgatttcattgaatttcttatatcggaaaattatattgctgtcagcagt
ggctccatgccaattctaaaggttgcaccaacagggaaggaagtgctgcttcagcgcaaa
caagtgctgagaaaagaacaggctatagcgaaggttattgtagaagataatgatttgttc
cagcgtttaagaatgatgcggaaaagccttgcagacagcgagggagttcctccgtttgtt
atattctctgatcagacgcttaagctcatttccagtcaaaaaccaggaaacgaagaagag
ctgtctaatataaaagggataggggatcataagctacaaaaatatggcggaatcattctt
gagacactgcagtcatataaacaggagaatcctgaagactgggaaaataaacaggaggtc
tcaagtacagatacgagcatgttgccgaagaaaaaacagaaaacagaaaactctcactta
gtttctctggagttattgcaagctggcttggatataaaacaaattgcagaaaaaagggct
atgactcctatcactatcgaaaaccatttgctgagatgtgatgaagaaggagaagtaatt
aattggagtcaatttttatctctggatgaccagcagcaaatagaagaagtgttagaacag
ggtgaaactgataagcttaaacctattaaggaacagcttccggcacatatcagttatttt
caaataaagatagcactcgtgctatttgccagaaaacaaaagatataa
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