Niallia taxi: NQZ71_21370
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Entry
NQZ71_21370 CDS
T09453
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ntx
Niallia taxi
Pathway
ntx03420
Nucleotide excision repair
ntx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ntx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NQZ71_21370
03430 Mismatch repair
NQZ71_21370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntx03400
]
NQZ71_21370
Enzymes [BR:
ntx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NQZ71_21370
DNA repair and recombination proteins [BR:
ntx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQZ71_21370
MMR (mismatch excision repair)
Other MMR factors
NQZ71_21370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_22
UvrD_C_2
UvrD_C
PhoH
Viral_helicase1
SLFN-g3_helicase
DEAD
nSTAND3
NACHT
AAA_16
AAA_23
NPHP3_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
WOD65754
LinkDB
All DBs
Position
pMEGANia:complement(448124..450460)
Genome browser
AA seq
778 aa
AA seq
DB search
MNSEFQQEQKRVASVTQVITEEMKKMEDESVKSKNEVVHIRRHFWDEVKVNTETFDDYLE
TIINLRQEAQVLSVSQSIHNHAAKRLSTLRRMQEVPYFGRIDFMEEGELAEEHIYIGIAS
LSDSSGEDFLIYDWRAPISSVYYDYQPGAVQYQTPGGTVYGSLEKKWQYLCRGGELQSMF
DTSLTIGDEILQQVLGEGTGKQMHNIVATIQQEQNQIIRFDHKKLLIVHGAAGSGKTSAA
LQRIAYLLYKYRDSLNADQIILFSPNSMFSSYVSNVLPELGEENMQQVTFQEYLNHHLSK
KFHVENPYEQLEYILTAEKSPSYNVRLASIRYKASTAFFEAIQAYRLSLELSGMLFKDII
FRGKPIVTAQAISERFYEHDTELRFHNRLEKLQDWLLEKITATQKGERKQPWVQEEIELL
SDADYHKARIYLAKKRGYKREEIADYEVEPAALASLIIQRKFKPFRKQIKDFRFIDFKGI
YKQIFIDSQAFKQWSKGETPVELAAICQTTIEMLAEDKLFYEDATPFLLLQELIQGFQSN
SAIKHIVVDEAQDYSPFQFEFLRRLFPSAKMTVLGDFNQAIFAHASDKVDFHTLSSLYGP
DETELINLAKSYRSTKPIIEFTRRLIPNGANIIPFERDGNRPKLEQVTDAFELHTSIKAK
VAELQARGFHSIAIICKSAEESIKAYESLASIDEIILVKSNAIEYEQGVVVVPAYMSKGI
EFDAVIIYNASGQVYADESLRKLFYTACTRAMHYLQLYSVGAPSKFLRDVLSAGVIEA
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgaatttcagcaggaacaaaaacgggtagcaagtgtgacacaggtaattacg
gaagaaatgaaaaaaatggaggatgagtctgtaaaaagcaaaaatgaagttgttcatatc
cgcaggcatttttgggatgaggtgaaggtgaatacagaaacctttgatgactatcttgaa
acgataattaacctgcggcaagaggctcaagttttgtcagtaagtcaaagcattcataat
catgctgcaaagcgtttatccacattacggagaatgcaggaggttccttattttggccga
atcgatttcatggaggaaggggaattagctgaggaacatatttatatagggatcgcctca
cttagtgattctagtggcgaagatttcctgatttacgattggagagctccaatttctagt
gtctactacgattatcagcctggagctgttcagtaccaaacacctgggggaacagtttac
ggctcccttgagaaaaagtggcaatacctttgccgtggcggcgaacttcaatctatgttc
gatacaagtctgactattggggacgaaatattacagcaggtgctcggtgaaggtacaggc
aaacagatgcataatatcgtagcgacaattcaacaggagcaaaaccagattattcggttt
gatcataagaaactgcttatcgtgcacggtgcagcaggcagtggcaagacatctgcagct
cttcagcgaattgcgtatctgctttacaaatatagagatagtctgaatgcggatcaaatc
attctgttttcacctaattcgatgttcagcagttatgtttccaatgtgctcccagagctt
ggtgaggaaaatatgcagcaggttacatttcaggaatatttaaatcatcatctgagtaaa
aagttccatgttgaaaacccatatgagcaattggaatatatactgactgcagaaaaaagt
ccttcatacaacgtaaggcttgcaagtatccggtataaagcatcgaccgctttttttgaa
gcgattcaagcatataggctgtcgctagaattatcgggaatgctatttaaggacattatc
ttcagagggaaaccaattgtaacggcacaagcaatttcagaaaggttttatgaacacgat
acagaacttcgctttcataatcgactggaaaagctgcaagactggctgctggaaaaaata
accgcgacacaaaagggtgagcggaaacagccgtgggtgcaggaggaaatagagctgctt
agcgatgctgattaccataaggcacgtatatacttagcaaaaaaacgcggctataaaaga
gaagaaattgccgactacgaagtggagcctgcagctctagccagccttattattcagcgg
aaattcaagccgttccgaaagcaaataaaagacttccgtttcattgattttaaaggtatt
tataagcagatttttatagattctcaagcttttaaacaatggagtaaaggggaaactcca
gtggaattggcggccatttgtcaaacaacgatagaaatgcttgctgaagataagcttttt
tatgaggatgctacaccttttttacttttacaggaattaatacaaggctttcagtcaaac
agcgccattaaacatattgttgttgatgaggcacaggattattcaccatttcagtttgag
tttttgcgaagattgtttccgtcggcaaaaatgacagtgctaggagactttaatcaggcg
atcttcgcacatgcaagcgataaggtcgatttccatacactttcaagcctttatggacca
gatgaaacagagctcatcaatttggcgaaaagctatcgctctactaaaccaatcattgaa
tttactcgccgacttattccgaatggagctaatattattccgtttgaacgtgacggtaat
cgtccaaagctggagcaggtaacagatgcatttgagttgcacacctccatcaaagcaaaa
gttgctgagttgcaggctcgtggctttcatagtattgcgataatctgcaaatctgcagaa
gaaagtattaaagcttatgaatctcttgcaagcattgatgaaataatactggtaaagagc
aatgcaatcgagtatgaacaaggtgtagttgtcgtaccagcatatatgtcaaagggcatt
gagtttgacgcagtcatcatttataatgcatcagggcaagtttacgctgatgaaagctta
cgtaagctcttttatactgcctgcacaagagctatgcactatttacagctatatagcgta
ggtgcaccaagcaaatttttgagggatgtattatcggcaggggttatagaagcttaa
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