KEGG   Nitrosopumilus ureiphilus: C5F50_00110
Entry
C5F50_00110       CDS       T06690                                 
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
nue  Nitrosopumilus ureiphilus
Pathway
nue03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nue00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    C5F50_00110 (tfb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nue03021]
    C5F50_00110 (tfb)
Transcription machinery [BR:nue03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     C5F50_00110 (tfb)
 Prokaryotic type
  Archaeal type
    TFB
     C5F50_00110 (tfb)
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Zn_Ribbon_1 Trm112p Sigma70_r4 Cyclin_N Baculo_ME53 RPA_interact_C HTH_AsnC-type HTH_11 Sigma70_r4_2 Auto_anti-p27 Zn_ribbon_tTFIIB HEF_HK Ribosomal_S27 Zn_ribbon_RRN7
Other DBs
NCBI-ProteinID: QLH07819
UniProt: A0A7D5R8V8
LinkDB
Position
17045..17950
AA seq 301 aa
MVSKGKDLCPRCAQGKLVTDNESGEMFCSKCGFVITEKLQEAGPEWRSFTQDEGGNKARA
GAPTSLTMHDMGLATIINPVNKDASGRPLTASMKSTIERLRTWDSRSQVHEPVDRNFRQA
FSELNRLKDKLTISDAVIEKAAYIYRKALEKGLVRGRSISALMASALYAACRDTETPRNL
KDVEQAANIKRKDIARCYRLLVKELDLKMPVTDSIQCVARIASRIGIAEKTKRYATKVLK
MAQDNEVSAGKDPMGLAAAALYLSCVKNGEDKTQRDIAEAANVTEVTIRNRYKGLKESLD
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atggtaagcaaaggtaaagatctatgccctagatgcgcacaaggaaaactagttactgat
aatgaatcaggagaaatgttttgctcaaagtgtggatttgtaattactgaaaaactacaa
gaggcaggacctgaatggaggtcctttacccaagatgaaggtggaaataaagcaagagct
ggtgcaccaacgtcactcacaatgcatgacatgggtcttgcaacaattatcaatcctgta
aacaaagatgcatctggcagaccacttacagcgtctatgaaaagtactattgaaagacta
aggacttgggatagtagaagtcaagttcatgaaccagttgatagaaattttcgacaggca
tttagcgaattaaacagactaaaagacaaactaacaatatctgatgcagtaattgaaaaa
gcagcctacatttacagaaaagcactagagaaaggtctagttcgaggtcgttccatttca
gctttgatggcatccgccctttatgctgcatgtcgtgatactgaaactccaaggaatctc
aaagatgtagagcaagcagctaatatcaaaagaaaggatattgcaagatgttacagatta
ctagtcaaagaacttgatttgaagatgccagtaactgattcaattcaatgtgttgcaaga
atcgcaagcagaattggaattgctgagaaaacaaaaagatacgcaacaaaggtgcttaaa
atggctcaagacaatgaagtctcagctggaaaagatcctatggggttggcagctgccgcg
ttgtatctttcttgtgtgaaaaacggtgaggacaagactcagcgtgatattgccgaagct
gcaaatgttactgaagttactattaggaataggtacaagggtctcaaagaatcacttgat
ctgtaa

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