Nitrosopumilus ureiphilus: C5F50_01905
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Entry
C5F50_01905 CDS
T06690
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nue
Nitrosopumilus ureiphilus
Pathway
nue03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nue00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C5F50_01905 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nue03021
]
C5F50_01905 (tfb)
Transcription machinery [BR:
nue03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
C5F50_01905 (tfb)
Prokaryotic type
Archaeal type
TFB
C5F50_01905 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_N
Ribosomal_S27e
HTH_3
DUF7342
Cyclin_C
BRF2-like_C_cyclin_rpt
HTH_11
HTH_AsnC-type
HTH_24
RB_B
A2L_zn_ribbon
DUF3363
Zn_Ribbon_1
DUF7685
DmmA-like_C
Motif
Other DBs
NCBI-ProteinID:
QLH05967
UniProt:
A0A7D5M6B0
LinkDB
All DBs
Position
336543..337454
Genome browser
AA seq
303 aa
AA seq
DB search
MSFQEIKCLRCGKNTLVTDVESSEVFCSNCGIVVEEKVNDSRSERRFTDSPTIKSHTGDK
TSLTRHDRGLSTMINPFDKDSAGNPLSTSMKSSMTRLRKWDSRSRVKTSNDKNLQQALLE
LLKMKEKLSLPDAIAEKASYIYRKALEKKLVRGRSISSLIAACLYAACRESETPRTLREV
AATIGIKRKEISATYRLIFKELDLKMPVVDSVSCVAKIASNAELSEKTKRYAMKILKNAE
RQNALAGKHPMGVAASALYLACINLEENRTQKEIADAAGITEVTIRNRCKSLKEVDGIWK
KLQ
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagcttccaggaaataaaatgcctccgatgtggaaaaaacacactagttactgatgta
gaatcttccgaagtattttgctcaaattgtggcattgtagttgaagaaaaggtcaatgat
agcaggtctgagagaagatttacagattctcctacaatcaaatctcatactggagacaag
acctcgttaacaaggcatgatcgtggtcttagcactatgattaatccttttgacaaagac
tctgctggtaatccattatcaacttcgatgaaatcatctatgacacgattacgaaaatgg
gacagtcgaagccgtgtcaaaaccagtaatgataaaaatctccaacaagctcttctagaa
ttgttaaaaatgaaagaaaaattatctttgcctgatgcaatcgctgaaaaagcatcttat
atttatagaaaagccttggaaaagaaactagttcggggacgttccatctcatcccttatt
gcagcttgtctttatgccgcatgtcgtgaatcagaaactccacgaacattaagggaagtt
gctgcaaccataggaattaaaagaaaagaaatctctgcaacctacagactaatcttcaaa
gaattagaccttaaaatgcccgtagttgattctgtttcatgcgttgcaaaaattgcaagc
aatgccgagttgtctgaaaaaacaaaacgttatgcaatgaaaatcctaaaaaatgcagaa
agacaaaatgccttagcaggaaaacatccaatgggtgttgctgcctctgctctatatctt
gcatgcattaatcttgaagaaaatagaacgcaaaaagagattgctgatgctgcaggaata
acagaagtcacaatccgaaacagatgcaaaagcctcaaagaggtggatggtatatggaaa
aaacttcaataa
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