Nitrosopumilus ureiphilus: C5F50_03250
Help
Entry
C5F50_03250 CDS
T06690
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
nue
Nitrosopumilus ureiphilus
Brite
KEGG Orthology (KO) [BR:
nue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nue03016
]
C5F50_03250 (endA)
Enzymes [BR:
nue01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
C5F50_03250 (endA)
Transfer RNA biogenesis [BR:
nue03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
C5F50_03250 (endA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
QLH06204
UniProt:
A0A7D5RA78
LinkDB
All DBs
Position
581541..582104
Genome browser
AA seq
187 aa
AA seq
DB search
MEETPIVNGEMISDQTCISDKNMIHELDLKGYGEIENEKLFLKQFETLFLLYSKRLILKK
GKKQIDFDTFMSICQKTDSDILTKFLIYRDLRNRGYVVKDGFGFGSDFRVYERGHFGEKG
AKFLIFGLNEGQQEKMGSLQKKIEDITQMGKEPIIAVIERRGEVIYYKINRMNFYENKAR
LEESFQI
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaccccaatagttaacggtgagatgatttctgatcaaacttgtatttctgat
aaaaatatgattcatgaacttgatctaaagggatacggggaaattgaaaatgaaaaatta
ttcttaaaacaatttgagactctatttctgttatattccaaaaggctgattttaaagaaa
ggcaaaaagcaaattgattttgatacttttatgagcatttgtcaaaaaactgattctgat
attcttactaaatttctaatatatcgtgatcttcgaaatcgtggttatgttgttaaggat
ggatttggatttggttctgactttagagtttatgagagaggacattttggtgagaaagga
gcaaaatttctgatctttggactaaatgaaggccaacaagagaagatgggtagtctacag
aaaaagattgaagacatcactcaaatgggaaaagaaccaataattgcagtaattgagcgg
cgtggtgaagtaatttattacaaaatcaacaggatgaatttctatgagaataaagctaga
ttagaagaatcatttcagatctaa
DBGET
integrated database retrieval system
