Nitrosopumilus ureiphilus: C5F50_03905
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Entry
C5F50_03905 CDS
T06690
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nue
Nitrosopumilus ureiphilus
Pathway
nue03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nue00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C5F50_03905 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nue03021
]
C5F50_03905 (tfb)
Transcription machinery [BR:
nue03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
C5F50_03905 (tfb)
Prokaryotic type
Archaeal type
TFB
C5F50_03905 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_24
HTH_3
HTH_23
FERM_F2
Motif
Other DBs
NCBI-ProteinID:
QLH06313
UniProt:
A0A7D5M4C6
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All DBs
Position
692217..693113
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AA seq
298 aa
AA seq
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MIMPFMQDENTCIHLTIISDDTTGEQVCENCGQVLINNVVDYSTDGFNENFNNARTGPKI
SITMYDGGLSTVIGKHNFDSSGKAVSHEMRRNINRMRMWDSRTKSNSTAHRNLMIALLEI
NKIKEKMSLSDAIIERSAYFYRKASEKKMIRGRSIKGIVGACIYAACRELGTTRTIIEIS
KCMHEKRNIIAKSYRLLFQQLSLEISIPDPTSSIIKFSNNLELSEKIKRDAIFIYDTLKE
KQVIAGKKPGAVAATVVYMACIKNNQGISQQQISKISGITQVTIRNRFKEFKQYVQLI
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgattatgccatttatgcaagatgaaaacacttgcattcatttaacaattatatctgat
gatacaactggggagcaggtttgcgaaaattgtgggcaagtactaattaataatgtggta
gattattctactgatggatttaatgaaaatttcaataatgcaagaacaggccctaaaata
tccattacaatgtatgatgggggtctttccacagtaattggaaaacataattttgattct
tctggtaaggcagtatctcatgaaatgagaagaaacattaacagaatgagaatgtgggat
tctagaaccaaatctaattctactgctcacagaaatctaatgatcgcacttttggagata
aacaagattaaagaaaaaatgtccttatctgatgcaattattgaaagatctgcatatttt
tacagaaaagcatctgaaaaaaaaatgatacgtggaagatcaatcaaaggaattgttgga
gcatgcatttatgctgcatgcagggaattaggaactactagaactattattgaaatttca
aaatgcatgcatgagaaaagaaacatcatagcaaaaagttatcgattgttattccaacag
ctaagtctagaaatatctattccagatccaacttcaagcataattaaattttccaataat
ctagaattatctgagaaaataaaacgagatgcaatttttatctatgatactctaaaagag
aaacaagttattgcagggaaaaaaccaggagctgttgcagctacagttgtgtatatggcc
tgcattaaaaataatcaaggtatatcacaacaacaaatatccaaaatatcaggtataacc
caagtaaccattcgtaataggtttaaagaatttaaacaatatgtgcaactaatttag
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