Nitrosopumilus ureiphilus: C5F50_04625
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Entry
C5F50_04625 CDS
T06690
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nue
Nitrosopumilus ureiphilus
Pathway
nue03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nue00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C5F50_04625 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nue03021
]
C5F50_04625 (tfb)
Transcription machinery [BR:
nue03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
C5F50_04625 (tfb)
Prokaryotic type
Archaeal type
TFB
C5F50_04625 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Ribosomal_S27
HTH_AsnC-type
Cyclin_N
RPW8
Lar_restr_allev
zf-CCHC_5
Zn_ribbon_3
HEF_HK
HTH_3
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
QLH06438
UniProt:
A0A7D5R6C0
LinkDB
All DBs
Position
complement(810179..811087)
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AA seq
302 aa
AA seq
DB search
MVKKTNPKDRCPRCGQGTVVTDANTGENFCGKCGFVITDKVEEAGPEWRSFSNEGENKSR
AGVPTSLAMHDMGLATVINPQNRDATGKPLTASMKSTIERLRTWDSRSQVHEPVDRNFRQ
AFSELDRLKDKLAVGDAVIEKAAYIYRKALEKGLVRGRSISALIASALYAACRDTETPRT
LKDIGQASNIKRKDIARCYRLLLRELNLKMPVVDPIKCISRIASKAGLSEKTKRKATKIL
QTAEENKISAGKDPMGLAAAALYVACVTNGENKTQRDVAEAAGVTEVTIRNRYKGLKVAL
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaaaaacaaatccaaaagacagatgtccaagatgtggacaaggcacagtagtt
actgatgccaatacgggtgagaatttttgtggaaagtgtggttttgtaattactgataaa
gtagaagaggcaggacctgaatggagatcattttcaaatgaaggtgaaaacaaaagcagg
gcaggagtcccaacatcacttgccatgcacgatatgggattagccacagtaatcaatcca
caaaatcgagatgctacaggaaagccattaactgcttctatgaaaagtacaattgaaaga
ctaaggacttgggatagtagaagtcaagtacatgaaccagttgatagaaattttagacaa
gcgttcagtgagttagacaggttaaaagacaaacttgcagtaggagatgcagtaattgaa
aaggcagcttacatttacagaaaagcacttgaaaaaggactagttcgaggtcgttccatt
tcagctttgattgcatcagcactttatgcggcatgcagggatacagaaactccacgaaca
ctaaaagacataggtcaggcaagcaacattaaacgaaaagatatcgcaagatgttatcgt
cttctgttaagagaattgaatttgaagatgccggtggtggatccaatcaaatgtatttcg
agaattgcaagcaaggcaggattatcagaaaaaacaaaaagaaaagcaacaaagatttta
caaactgcagaagagaataaaatttcggcaggaaaagatccgatgggattagcagcagca
gcactttatgtagcatgtgttacaaacggagaaaacaaaacacaaagagatgtagcagaa
gctgcaggagttacagaagttaccattagaaatagatacaaaggtttgaaagtagcatta
aacctctaa
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