Nitrosopumilus ureiphilus: C5F50_07580
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Entry
C5F50_07580 CDS
T06690
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nue
Nitrosopumilus ureiphilus
Pathway
nue03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nue00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C5F50_07580 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nue03021
]
C5F50_07580 (tfb)
Transcription machinery [BR:
nue03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
C5F50_07580 (tfb)
Prokaryotic type
Archaeal type
TFB
C5F50_07580 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
HTH_AsnC-type
HTH_Crp_2
HTH_11
HTH_3
Ribosomal_L37e
Zn_ribbon_tTFIIB
A2L_zn_ribbon
RB_B
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
QLH06947
UniProt:
A0A7D5M7M1
LinkDB
All DBs
Position
complement(1300861..1301781)
Genome browser
AA seq
306 aa
AA seq
DB search
MVTTNQNSLCLRCGKNSLLTDDTTGERFCGKCGFVISETLQDSGPEWRSFSKEGGTDPAR
TGAPSSLMIHDMGLSTVINPINKDASGKPLSTSMKSTIERLRTWDSRSQVHEPIDRNLRQ
ALSDLNKLKDKVAIPANVLEKASYIYRKALEKKLVRGRSIAAMIAASLYAACRDTETPRT
LKDIADAANVKRKDIARCYRLLHHELELKMPVVDSIQCIARISSKLDISEKTKRYAVKVL
KDAQERKESAGKDPMGLAATALYLSCVHNGVAITQRDLAEAAGVTEVTIRNRYKGLKADQ
TTKSEL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggttacgacaaatcaaaattctctttgtttgcgttgcggaaaaaattctttacttact
gatgatacaactggagaaagattttgtggtaaatgcggttttgtgatttctgagacatta
caagattcagggcctgagtggagatcattttcaaaagagggcggcacagatcctgctaga
actggtgctccatcatcgctgatgattcatgatatggggttatccactgtgatcaatcca
ataaacaaggatgcgtctggaaaaccactttctacatctatgaaaagtacaattgagaga
ctcagaacttgggatagtaggagccaagttcatgagccaattgatagaaatctccgacaa
gcactaagtgatttaaataaattaaaagacaaggttgcaattcctgcaaatgttcttgaa
aaagcatcatacatttacagaaaagcattggagaaaaaactagtacgtggaagatcaatt
gctgcaatgattgcagcatcactatatgctgcatgcagagatactgaaactcctagaact
ctaaaagatattgcagatgctgcaaatgtaaagcgaaaagatatcgcaagatgctataga
ttactccatcatgaattggaattaaaaatgcctgttgtagattcaattcagtgtattgca
agaatttcaagcaaactggatatttctgagaaaacaaaacgttatgcagttaaggtgctt
aaagatgcacaagagcgaaaggaatcagcaggaaaagatcctatgggacttgcagcaact
gcattatacctgtcatgtgttcataacggagtcgcaatcactcaacgagaccttgcagaa
gctgcaggcgtcacagaggttacaatcagaaatcgatacaagggattaaaagcagatcaa
actacaaaatctgaactttaa
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