KEGG   Nitrosopumilus ureiphilus: C5F50_11455
Entry
C5F50_11455       CDS       T06690                                 
Name
(GenBank) RNA-binding protein
  KO
K07573  exosome complex component CSL4
Organism
nue  Nitrosopumilus ureiphilus
Pathway
nue03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nue00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C5F50_11455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nue03019]
    C5F50_11455
Messenger RNA biogenesis [BR:nue03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     C5F50_11455
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     C5F50_11455
SSDB
Motif
Pfam: ECR1_N RRP4_S1
Other DBs
NCBI-ProteinID: QLH07617
UniProt: A0A7D5R7J1
LinkDB
Position
1973569..1974120
AA seq 183 aa
MSENATFPGDKIASIEEYEAGHNTFDDGDMVRAATVGEKDIDKETRTANIKHPKLLSIPQ
VGDIIIGTVAAVMSSMIAVSIDYINGKPTTSKVECVCSTRNLRIRNVALVNDIVKLKILN
HLNGTIHAAINEPDLGILFTKCRKCGGKVVPMRDAIKCTECAWIDERKLSSDFGNSDFIK
LRE
NT seq 552 nt   +upstreamnt  +downstreamnt
atgtctgaaaacgcaacatttccaggggacaaaatagcttctattgaagaatacgaggct
gggcacaacacctttgatgatggagacatggtcagagcagcaactgtaggcgagaaagac
attgacaaggaaacgcgtactgccaacattaagcatccaaaacttctatcaattcctcaa
gtaggggacatcattattggaacagttgcagcagtaatgtcatctatgattgcagtttca
attgattacattaatggaaaaccaactacatcaaaagtagaatgtgtttgttcaacgcga
aacttgagaataagaaatgtggctctggttaatgacatagtaaaattaaaaattctgaat
catcttaatggtacaattcatgcagcaattaatgaaccagatttgggaattctattcaca
aaatgtagaaaatgtggaggaaaagttgttccaatgcgtgatgctataaaatgtacagaa
tgtgcatggattgatgagagaaaactttcttctgattttggcaatagtgatttcataaag
ttgagagagtaa

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