Nitrosopumilus ureiphilus: C5F50_11800
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Entry
C5F50_11800 CDS
T06690
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
nue
Nitrosopumilus ureiphilus
Brite
KEGG Orthology (KO) [BR:
nue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nue03400
]
C5F50_11800
DNA repair and recombination proteins [BR:
nue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
C5F50_11800
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Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
QLH07678
UniProt:
A0A7D5R8B6
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All DBs
Position
complement(2025311..2025715)
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AA seq
134 aa
AA seq
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MTDIFTPEKRSWVMSRIRGTNTKIDLQMNEILKGLGFSYKMYPKMFGNPDFVLEEERIII
FCDGDFWHGYNYHKKKKPRQKFWIDKIERNMRRDAKIARKLRRDGWSVLRFWEHDIEKRT
GICIDRIIRKVLEK
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgactgacatctttactcctgaaaagagatcatgggtaatgtcccggatcaggggaacc
aacacaaagatagacttgcagatgaacgagattctcaaaggactgggcttttcatacaag
atgtatccaaagatgtttgggaatcctgactttgtcctagaagaagaaaggatcataatc
ttctgcgacggagatttctggcacggatacaattatcacaagaagaaaaaacctaggcag
aagttctggatagataagattgaacgaaatatgagacgtgatgccaagattgctagaaaa
ctcagaagagacggatggtcggttctccgattctgggagcacgatattgagaaaagaaca
ggaatatgcattgataggatcataagaaaagttttagaaaaataa
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