Nonlabens ulvanivorans: R1T42_01105
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Entry
R1T42_01105 CDS
T09493
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nul
Nonlabens ulvanivorans
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nul03032
]
R1T42_01105
03400 DNA repair and recombination proteins [BR:
nul03400
]
R1T42_01105
Enzymes [BR:
nul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
R1T42_01105
DNA replication proteins [BR:
nul03032
]
Prokaryotic type
DNA Topoisomerases
R1T42_01105
DNA repair and recombination proteins [BR:
nul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
R1T42_01105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WOI23047
LinkDB
All DBs
Position
261791..262870
Genome browser
AA seq
359 aa
AA seq
DB search
MTLSPDQIKECLTQPEAAAQLANLVYIHNDHLNIYRKKYGRGFTYLIHNKERLVDKKQLK
RIKSLVIPPAWSEVRISELPNGHLQVVGRDDKGRKVYLYHDMWSLLRNQTKFFKMSAFAK
VLPKIRKRLENDLDQDGMPQSKCLALVLSIMDQTYIRVGNQHYADKNDTYGLSTMRTRHV
KDTDQGVLFSFVGKKGVSQETSIEDPDLVDHIHQCEEIPGWELFQYYDEHGQHQSIDSGM
INDYIHDVAGDIFSAKDFRTWGATREFFKSLIELDLYDDEKGCEKNILKSLDAAADALGN
TRTVCEKYYVHPQLPESYRNGSFEKYRARYHASKDSEYFESSEKCVQEIIADFEIEFDV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgactttatcacctgatcaaataaaagaatgccttactcaaccagaagcagcggctcaa
ctagcaaatctagtgtatatacataacgatcatttaaatatttaccgcaaaaagtatggt
agaggattcacttacttaattcataataaagagcgtctagttgataaaaaacagcttaaa
agaattaaatctttggtgattccaccggcatggagtgaggttaggattagtgaactgcct
aatgggcatttacaagtagtaggtcgcgatgataaaggtagaaaagtctatttatatcat
gacatgtggtcgctattacgcaatcaaactaagttttttaaaatgtctgcttttgcaaag
gtgttacctaaaataagaaagagattggaaaatgatcttgatcaagatggaatgccacaa
tctaagtgtctcgccctagttttaagcatcatggatcaaacttacataagagtaggtaat
caacactatgcagataagaatgatacttatggcttatcaaccatgcgcaccagacatgtt
aaggatactgatcaaggtgtactgttttcatttgttgggaaaaaaggtgtgtcgcaagaa
accagtatcgaggatccagatctggtagatcatatccatcaatgtgaggaaataccagga
tgggaattatttcaatactatgatgagcatggacaacatcaatctatagatagtggaatg
attaatgactatattcatgacgttgcaggtgatatttttagtgcaaaagatttcagaact
tggggcgcgacacgtgagttttttaaaagtcttatagaattagatctttatgatgatgaa
aagggctgtgagaaaaatattcttaaatcattggacgcagctgcagatgctctaggaaac
acgagaacggtatgtgaaaagtattatgtgcatccgcaattaccagaatcttataggaat
ggttcttttgaaaagtatagggctaggtatcatgcttcaaaagatagtgagtactttgaa
tcaagtgagaaatgcgttcaagaaattatagcagattttgaaattgagtttgatgtctaa
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