Nonlabens ulvanivorans: R1T42_03260
Help
Entry
R1T42_03260 CDS
T09493
Name
(GenBank) ABC transporter transmembrane domain-containing protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
nul
Nonlabens ulvanivorans
Pathway
nul02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
R1T42_03260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nul02000
]
R1T42_03260
Enzymes [BR:
nul01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
R1T42_03260
Transporters [BR:
nul02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
R1T42_03260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_22
RsgA_GTPase
ABC_ATPase
AAA_24
AAA
nSTAND3
DEAD
AAA_29
AAA_15
AAA_25
AAA_16
AAA_5
MMR_HSR1
APS_kinase
DUF87
AAA_18
AAA_7
PPV_E1_C
AAA_30
8xMP
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WOI23473
LinkDB
All DBs
Position
complement(720482..722302)
Genome browser
AA seq
606 aa
AA seq
DB search
MNYFNEILGYAKPYKKWAVLNIISNVLFAFFSTLSFVSLMPVLQVLFQETEEVYNKPVWT
DFTKTKEFVEGYVNYYVSEVAKNDQEQALILMIVLVISLFFLKNVFGYLGMYFLTFFRTG
IMKDLRDDLYKKIVNLPVSYFSEKRKGDVISRATTDVIEIQSSFLSILELIVKEPLNIIF
ALAAMLMFSVKLTLFVLVFIPISGYIISLIGKRLKSKSERVQKEQGAVLSQLEETLGGLK
VIKGFNAEERMQDSFEKTTSRFRRFTNSLDKRKSFASPVSEVLGIAVIGVLLWFGGRMVL
VDGTIAGSTFITFMGLAYAILTPAKALSKASYGVKKGNAAAERVLQILHTENTIVDPTNP
IIIDRFKQGININNVTFAYEDENVLKNFSLHIPKGKSVALVGQSGSGKSTIANLLTRFYD
VQDGTISMDGHDIKDLSLKSLRDQMALVTQDSILFNDTIAVNVALANKNASDEEIINALK
IANAWEFVKDLPDGIHTNIGDSGGKLSGGQKQRLSIARAVLKNAPILVLDEATSALDTES
ERLVQDALEKVMKNRTSIVIAHRLSTIQNADNIVVMNKGEIAEQGTHAELIEMKGLYNGL
VGMQSL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaattatttcaatgagattcttgggtatgcaaagccttataaaaaatgggcggtactc
aatatcataagtaatgtactctttgcattttttagtacgttatcatttgtttccctaatg
cctgtattacaggtgctatttcaagaaactgaagaagtttataacaaacctgtctggact
gattttacaaaaacaaaagagtttgtagaaggctatgtcaattactacgtatctgaagtt
gcaaaaaatgatcaagaacaagcgttaatcttaatgattgtcttagtaatcagtttgttc
tttttaaagaatgtatttggttatttaggaatgtatttcttgacatttttcaggactgga
attatgaaggatttacgtgatgatttatataagaaaatagtaaatcttcctgtttcttat
ttttctgaaaaacgtaaaggtgatgtgatttctcgcgccaccacagatgtgattgagatt
caaagtagttttctatccatactggagttaatcgttaaagaaccgctcaatattattttt
gcacttgccgctatgttgatgtttagcgttaaactgactttatttgtattagtgtttatt
cccattagcggttatatcatatcgcttataggtaaacgattaaaaagtaaatcagaacgt
gtacaaaaggaacaaggtgctgttctttctcaactagaagaaactctaggtggacttaaa
gtcattaaaggttttaatgcagaagaacgcatgcaagatagctttgagaaaaccacaagc
agattccgtaggtttaccaacagtcttgataaacgtaaaagttttgccagcccagtaagt
gaagttttaggtattgccgtcataggtgttttattatggtttggtggacgcatggtttta
gtagatggcactatcgctggatctacctttattacttttatgggattagcatatgccatt
cttacaccagcaaaagcactttctaaagctagttatggtgtaaaaaaaggtaacgctgca
gcagaacgtgttcttcaaattttacatactgaaaacaccatcgttgacccaactaaccca
ataattattgatcgttttaagcaaggcattaacatcaataatgtcacctttgcttatgaa
gacgaaaacgtattaaagaacttctctcttcatatacccaaaggaaagagtgttgcctta
gtaggtcaaagtggttctggtaaaagtactatcgcaaatctacttactcgattctatgac
gtgcaagacggtaccatttctatggatggtcacgatataaaggatttaagtcttaaaagc
ttacgtgatcaaatggcactggtaacacaagattctatcttatttaatgatacgattgct
gttaacgttgctctagccaataaaaacgctagtgatgaagaaatcattaacgctcttaaa
attgcaaacgcttgggaatttgtaaaagaccttcctgatgggatccatactaacataggc
gatagtggtggaaaactaagtggtggacaaaagcaaagactttcaatcgctagagcagtg
cttaaaaacgctcctatcctagtacttgatgaagcgacaagcgcactggatacagaaagt
gaacgtttggtgcaagatgctcttgaaaaagtaatgaaaaacagaacctctattgtgatt
gcgcacagactttctaccattcaaaatgccgacaacattgtagttatgaataaaggtgaa
attgcagagcaaggaacacatgccgagttgattgaaatgaaaggcttgtataacgggcta
gtaggcatgcagagtttgtaa
DBGET
integrated database retrieval system
