Nonlabens ulvanivorans: R1T42_04240
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Entry
R1T42_04240 CDS
T09493
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nul
Nonlabens ulvanivorans
Pathway
nul03030
DNA replication
nul03430
Mismatch repair
nul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R1T42_04240
03430 Mismatch repair
R1T42_04240
03440 Homologous recombination
R1T42_04240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nul03032
]
R1T42_04240
03400 DNA repair and recombination proteins [BR:
nul03400
]
R1T42_04240
Enzymes [BR:
nul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R1T42_04240
DNA replication proteins [BR:
nul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R1T42_04240
DNA repair and recombination proteins [BR:
nul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R1T42_04240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
PP_kinase_C
Motif
Other DBs
NCBI-ProteinID:
WOI23667
LinkDB
All DBs
Position
complement(919827..921188)
Genome browser
AA seq
453 aa
AA seq
DB search
MYAIVDVETTGGKFNEEGITEIAIYKFDGHEIVDQFASLVNPEKEIQPFVVKLTGINNKM
LVRAPKFYEVAKRVIEIMDGAVLVAHNANFDYRMLRIEFERLGYEFQTQTLCTVELAQKL
MPEEDSYSLGKLTRSLGIPITDRHRATGDALATVKLFKMLMAKDTDKTIISTSLKSETRK
KVEPNLKKLIEKSESTTGVYYFYNQDNELIYLGKSKNIKKRITQLFTSSQPKQKKIKKLV
TDISFEKTGNELIALLKENVEIKKNKPKFNKPLKRKNFSHGLYSFIDDHGYINLTVKNIG
KDMGYITSFSSLKSGKNFLEKMASEHQLCKKLVGLEKTDSSCENYPIEKCLGACIRKEDK
ESYNNRVQEIIDQNSFVNKNIIIVDNGREATERSAIMIEDGIVLGYGFVDLQFQVTHPQV
LKKVITPLSNNLDSRHIVQSYLRHKKVKRIIEY
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaatagtagatgtagaaactacaggaggaaaatttaatgaagaaggcattaca
gaaattgccatctataaatttgacggacatgaaattgtagatcaatttgctagtctagta
aatccagaaaaagaaattcaaccttttgttgttaagctaacaggtattaataacaaaatg
ttagtacgtgctcctaaattttatgaagttgcaaaacgtgtgattgaaataatggatgga
gccgtgttagtcgcacacaatgcaaactttgactaccgtatgctacgcatagagtttgaa
cgactaggttatgaatttcaaacacaaacgttatgtacggtagaactagcacaaaaatta
atgcccgaggaagacagctatagtctcggtaaattaacgcgctctctaggcatacctata
acagacagacatagagctactggtgacgcacttgctacagttaagttatttaaaatgtta
atggcaaaggatactgataaaacaattatctctacaagccttaagtcagaaactcgtaaa
aaagtagagcctaaccttaaaaaattaatagagaaatctgaatcaacaacaggtgtctat
tacttttataatcaggataatgaattaatatatttaggcaaaagtaaaaatattaagaaa
agaatcacgcaactttttaccagctcgcaacccaaacagaaaaagatcaagaaacttgtt
accgatatctcatttgaaaaaactggtaacgaacttatcgcattacttaaagagaatgtt
gaaattaaaaagaacaagcctaagtttaataaaccattaaaaagaaagaacttttctcac
ggcctatattcttttatcgatgatcatggctatataaatctgacagtaaaaaatatagga
aaagatatgggctacattaccagcttcagctctttgaaatctggtaagaactttctagaa
aaaatggcttctgaacatcaactatgcaagaaactggtgggacttgaaaaaactgattca
agttgtgaaaattatcctattgaaaaatgcttaggtgcttgtataagaaaagaagacaaa
gaatcttataacaacagagttcaagaaattattgatcaaaacagttttgtaaataagaat
attattatcgttgacaatggtcgcgaggctacagagcgcagtgcaattatgatagaagat
ggaatcgttttaggctatggctttgttgacttacaatttcaagtaacacatccacaagtt
cttaaaaaagttatcactccactttcaaataatctcgattcgaggcatatagtacaaagt
tatttaagacataagaaagttaaaagaattatagagtattaa
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