Nonlabens ulvanivorans: R1T42_05615
Help
Entry
R1T42_05615 CDS
T09493
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nul
Nonlabens ulvanivorans
Pathway
nul03030
DNA replication
nul03430
Mismatch repair
nul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R1T42_05615 (dnaX)
03430 Mismatch repair
R1T42_05615 (dnaX)
03440 Homologous recombination
R1T42_05615 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nul03032
]
R1T42_05615 (dnaX)
03400 DNA repair and recombination proteins [BR:
nul03400
]
R1T42_05615 (dnaX)
Enzymes [BR:
nul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R1T42_05615 (dnaX)
DNA replication proteins [BR:
nul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R1T42_05615 (dnaX)
DNA repair and recombination proteins [BR:
nul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R1T42_05615 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
AAA_30
AAA_14
Rad17
AAA_5
DNA_pol3_gamma3
TIP49
Mg_chelatase
nSTAND3
AAA_16
AAA_18
ABC_tran
Sigma54_activ_2
AAA_19
DNA_pol3_delta_C
RCF1-5-like_lid
AAA_7
NTPase_1
NPHP3_N
RNA_helicase
DUF815
TsaE
DUF5800
AAA_2
AAA_28
DUF5906
SRP54
AAA_assoc_2
APS_kinase
Sigma54_activat
NACHT
Motif
Other DBs
NCBI-ProteinID:
WOI23933
LinkDB
All DBs
Position
1233599..1235476
Genome browser
AA seq
625 aa
AA seq
DB search
MEPFIVSARKYRPETFEDVVGQSAITKTLENAIASNHLAQALLFTGPRGVGKTTCARILA
KKINQQNAEVDPDEDFAFNIFELDAASNNSVDDIRSLTEQVRIPPQVGNFKVYIIDEVHM
LSTAAFNAFLKTLEEPPAHAIFILATTEKHKIIPTILSRCQIFDFKRITVADMRGHLKRI
AGIEGITADDEALHIIAQKADGALRDSLSIFDRVVSFSGKDLTVQAVTENLNVLDRETYF
NISDLIITGNIPQLLVDYDVIMSKGFDGHHFIAGLASHFRDLMVCKDERTLHLLDVSDTV
KVKYAEQSRKVDLVFLREAINLSNEADFKYRSSRNPRLHIELCLMQLASILTDGEKKNDV
NYIIPASNFKNHPVAAEASSSYQTPQEPASKQIEEATAVQASQPSKIEASNALNRTSSNQ
SIDISIDKKELTKPIIESSTVSHQTSRQDTTTAQQNSNKSIEEARKALLDRNKNNVSGLS
LQAINAKKAHVVKNNQDHIETDALPEENFTEQDAQECWSSYAAHLRERGQLILASIMEAD
TPKLIDHKLVLRYPNLSMKEDLEKAQGQVLEHIKAALKNYNIELEIHVDKAVQKKYAYTD
HEKFLKLVEKNPAIDLLRRNFDLEF
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggagccatttatagtatctgctagaaaatacagacccgagacttttgaagatgtcgta
ggacaaagcgctattactaaaacgcttgaaaatgcaattgctagtaatcatctagcacaa
gctttgctatttactggtcctcgtggtgtaggaaagacaacctgcgcccgtattcttgca
aaaaaaatcaatcaacaaaatgccgaggttgatcccgatgaggattttgcctttaatatt
tttgaactagatgctgcttctaacaactctgtagacgatatacgtagtcttacagagcaa
gtacgtattcctccacaagtaggtaactttaaggtctatattattgatgaggtacatatg
ctatcaacagcggcttttaatgcgtttcttaaaaccttagaagaaccgccagcacatgct
atatttattctagcaactacagagaagcataaaattatacctaccattctatctcgttgt
cagatttttgattttaaacgtattactgtggcagacatgcgaggccatttaaaacgtatc
gcaggtattgaaggaattacagcagacgatgaagcattgcatattatagctcaaaaggct
gatggtgccttgagagattcactttctatatttgatagggttgtcagtttctcaggtaaa
gacctgacagtacaagcggtaactgagaatttaaatgtacttgatagagagacttatttt
aacatcagtgaccttatcataactggtaacataccgcaattactggtagattatgatgtg
atcatgtctaaaggttttgacggtcatcattttatcgctggccttgcttctcacttcaga
gatttaatggtttgtaaagacgagagaactcttcatctactagacgtgtctgatacagtg
aaagtaaaatatgccgaacaatccagaaaagtcgatttagtatttttaagagaggccatc
aatttaagtaatgaagccgattttaaatatcgcagcagtcggaacccgagactacatatt
gaattgtgccttatgcagcttgcctctatcttaacagatggagaaaaaaaaaatgatgta
aactacatcattccagcttccaattttaagaatcatcctgttgctgctgaagcgtctagc
tcttatcaaacacctcaagaaccagcaagtaaacaaattgaagaagctacagcggtgcaa
gctagtcaaccttcaaaaatcgaagcgtctaacgcactgaatcgtactagtagtaatcaa
agtatcgatatctctatagataaaaaagagctaactaaacctattattgagtcatcaacc
gtttctcatcagacatctagacaagataccacgactgcccaacaaaactctaataaatct
attgaagaagctcgtaaagccttattagatagaaataaaaacaatgttagtggtttatcg
ctacaagccattaatgcaaaaaaggctcatgtagttaaaaacaatcaggatcacatagaa
acggacgctcttcctgaagaaaattttacagagcaagatgctcaagagtgctggtcatct
tatgccgcacatttaagagaacgtggtcaattgattctagcctctataatggaggctgat
acacctaaacttatcgatcacaaactagtattgcgctatcctaatctttctatgaaagaa
gatttagagaaagcacaaggtcaagttctagaacatatcaaagctgctttgaagaattat
aatatagaattagaaattcatgttgataaagctgtacagaaaaaatatgcctataccgat
catgaaaaattcctcaaactagtggaaaaaaatccagcgatagacttgttgcgtcgcaat
tttgatcttgagttttaa
DBGET
integrated database retrieval system
