Nonlabens ulvanivorans: R1T42_05850
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Entry
R1T42_05850 CDS
T09493
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
nul
Nonlabens ulvanivorans
Pathway
nul03030
DNA replication
nul03430
Mismatch repair
nul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R1T42_05850 (holA)
03430 Mismatch repair
R1T42_05850 (holA)
03440 Homologous recombination
R1T42_05850 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nul03032
]
R1T42_05850 (holA)
03400 DNA repair and recombination proteins [BR:
nul03400
]
R1T42_05850 (holA)
Enzymes [BR:
nul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R1T42_05850 (holA)
DNA replication proteins [BR:
nul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R1T42_05850 (holA)
DNA repair and recombination proteins [BR:
nul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R1T42_05850 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Glyco_transf_25
Motif
Other DBs
NCBI-ProteinID:
WOI23977
LinkDB
All DBs
Position
1282821..1283828
Genome browser
AA seq
335 aa
AA seq
DB search
MSDTKKIIEDIKNRKLAPIYFLYGNEPYFIDEISDYIAANVLDEGEKGFNQMVLYGRDID
MGELVENAKRFPMMADYQVIIVKEAQDLARHWDKFESYAKQPQPTTILVFNYKYKTPDKR
KKVFKEMAKNGVFFESKPLYENKVLPWINSHLKSNGYNIEPKAGQMLIEFLGTEIAKIKN
ELDKLMIIVPAGTMITPQLIEENIGISKDYNNFELRKALGSRDTVKVNRIINYFAENPKD
NPLVVTIGQLHSFFVQLLKLHAMTDRNPQTVARQIGVSPFFVQEYFTAAKHYPMKHCSHA
IKIIRDIDMKSKGVGTNKPQQHDLLQELIVNIMYP
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataccaaaaaaattatagaagatataaagaataggaaacttgcgcctatttac
tttttatatggtaatgaaccttattttattgatgagataagcgattacattgctgcaaat
gtactggacgaaggcgaaaaaggctttaaccagatggtgctgtatggtcgtgatatagac
atgggcgagctggttgaaaatgcaaagcgtttcccgatgatggcagactatcaggtgatt
atcgttaaagaggcacaagatctagcacgtcactgggataagtttgaatcttatgcaaaa
cagccgcaacctactacgattctagtctttaattataaatacaaaacgcctgacaagcgc
aaaaaggtgtttaaagaaatggcaaagaatggtgttttctttgaaagcaaaccgttgtat
gaaaataaagtcctgccatggatcaatagtcatttaaagagtaatggttataacattgag
cccaaagctggacagatgctgattgagtttctgggaactgagattgccaaaatcaaaaac
gaactggataaattaatgattattgtccctgcgggaaccatgatcacaccacagctgatt
gaagaaaatataggaatctcaaaagattacaacaactttgaactgcgcaaggcgctggga
tctcgagatacggtaaaggtgaatcgcattatcaactattttgccgagaatcctaaggac
aatccactggtggttaccataggtcaattgcacagcttttttgtacagttattaaaattg
cacgcgatgaccgaccgcaatccacaaacggtggcaagacagataggtgtgagtccgttt
tttgtacaagaatattttacggcagcaaagcactaccctatgaaacactgcagtcatgcg
atcaagatcatacgcgatatagatatgaagtctaaaggtgtaggaactaataaaccacaa
caacacgatttactacaagagttgatcgttaatatcatgtatccataa
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