Nonlabens ulvanivorans: R1T42_05965
Help
Entry
R1T42_05965 CDS
T09493
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
nul
Nonlabens ulvanivorans
Pathway
nul00740
Riboflavin metabolism
nul00790
Folate biosynthesis
nul01100
Metabolic pathways
nul01110
Biosynthesis of secondary metabolites
nul01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
R1T42_05965 (ribB)
00790 Folate biosynthesis
R1T42_05965 (ribB)
Enzymes [BR:
nul01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
R1T42_05965 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
R1T42_05965 (ribB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
ATPase_2
Peptidase_M17_N_1
Motif
Other DBs
NCBI-ProteinID:
WOI24000
LinkDB
All DBs
Position
1305013..1306167
Genome browser
AA seq
384 aa
AA seq
DB search
MTASTAIQKNTSFKLDSIEDAIEDIKKGKVIIVVDDENRENEGDFLASAQSVTPEMINFM
ATHGRGLICMPITESRCKELELDMMVTNNSDPMETAFTVSVDLRGHGVTTGISASDRSKT
IQAMIHEDTRGHDLSKPGHIFPLRARDGGVLRRTGHTEAAIDFARLAGHEPAGVIVEIMN
EDGTMARLPQLIEVAKKFDVKLVSIEDLVAYRMKNDSLIEKKEDFNLRTRFGEYRLRAYQ
QTTNQQIHLALTLGDWNEDEEVLTRMNSTQVNNDLFSTLTSEADRKIDAMFERLNKEGKG
AIVFINQQFQPENMLSRLEQLKELQQNGEVKAPRKNLDNRDYGIGAQILHDLKISKLKLL
TNSEQSKRIGMIGYGLEITETITY
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctagtactgcaattcaaaaaaatacttcctttaaactagactctattgaagat
gctatagaggacatcaaaaaaggtaaggttatcattgttgtagatgatgaaaatagggaa
aacgaaggtgactttctggcttccgcacaatctgtaacaccagaaatgatcaactttatg
gccactcatggtcgtggattgatatgcatgcctattacagagtcgcgctgtaaagaatta
gaactggatatgatggttactaataattctgatcctatggaaactgcttttacggtttct
gtagatctaagaggtcatggagtaactactggtattagtgccagcgatagatcaaaaacg
atccaagcgatgattcatgaagatactagaggtcatgatttaagtaaaccaggtcacatt
ttccctttaagagcacgagatggtggcgttttaagaagaactgggcatactgaagctgct
attgattttgcaagattagccggacatgaacctgcaggtgtgattgtagaaatcatgaat
gaagatggaacgatggctcgcttacctcaattgattgaagttgcaaaaaagtttgatgta
aaattagtttctatagaagatttagtggcttatcgtatgaaaaacgatagcctcatcgag
aaaaaagaagactttaatttacgcactcgttttggtgaatatagattaagagcttatcaa
caaaccacaaatcaacaaatacacctagcattaaccttaggtgattggaatgaagatgag
gaagtactaacacgtatgaactctactcaggttaataatgaccttttcagtacgcttaca
tctgaggctgacagaaaaatagacgctatgtttgaacgtcttaataaggaaggaaaagga
gcaattgttttcataaatcagcagtttcaacctgaaaatatgttgagtagactagaacaa
ttaaaagaattacaacaaaatggcgaggtaaaagcgccacgcaaaaacctagataataga
gattacggtataggtgctcaaatattgcacgacttaaaaatctcaaaattaaagctgtta
actaatagtgagcaaagtaagcgtataggtatgataggttatggtctagagatcacagaa
accataacttattaa
DBGET
integrated database retrieval system
