KEGG   Nonlabens ulvanivorans: R1T42_06150
Entry
R1T42_06150       CDS       T09493                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
nul  Nonlabens ulvanivorans
Pathway
nul00010  Glycolysis / Gluconeogenesis
nul00020  Citrate cycle (TCA cycle)
nul00260  Glycine, serine and threonine metabolism
nul00280  Valine, leucine and isoleucine degradation
nul00310  Lysine degradation
nul00380  Tryptophan metabolism
nul00620  Pyruvate metabolism
nul00630  Glyoxylate and dicarboxylate metabolism
nul00640  Propanoate metabolism
nul00670  One carbon pool by folate
nul00785  Lipoic acid metabolism
nul01100  Metabolic pathways
nul01110  Biosynthesis of secondary metabolites
nul01120  Microbial metabolism in diverse environments
nul01200  Carbon metabolism
nul01210  2-Oxocarboxylic acid metabolism
nul01240  Biosynthesis of cofactors
Module
nul_M00009  Citrate cycle (TCA cycle, Krebs cycle)
nul_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nul_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
nul_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:nul00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    R1T42_06150 (lpdA)
   00020 Citrate cycle (TCA cycle)
    R1T42_06150 (lpdA)
   00620 Pyruvate metabolism
    R1T42_06150 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    R1T42_06150 (lpdA)
   00640 Propanoate metabolism
    R1T42_06150 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    R1T42_06150 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    R1T42_06150 (lpdA)
   00310 Lysine degradation
    R1T42_06150 (lpdA)
   00380 Tryptophan metabolism
    R1T42_06150 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    R1T42_06150 (lpdA)
   00670 One carbon pool by folate
    R1T42_06150 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nul04147]
    R1T42_06150 (lpdA)
Enzymes [BR:nul01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     R1T42_06150 (lpdA)
Exosome [BR:nul04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   R1T42_06150 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 NAD_binding_8 HI0933_like GIDA FAD_binding_3 AlaDh_PNT_C Lys_Orn_oxgnase DAO Thi4 3HCDH_N Astro_capsid_p2 IFT46_B_C DUF1870 Amino_oxidase Mqo
Other DBs
NCBI-ProteinID: WOI24037
LinkDB
Position
complement(1353378..1354781)
AA seq 467 aa
MSTYDVAIIGSGPGGYVAAIRCAQLGMKTAIIEKYNTLGGTCLNVGCIPSKALLDSSHHY
DDAMKHFEEHGIEIPGEIKINFEKMIARKKQVVDQTCDGVAFLMKKNNIDVYTGMGSFKD
ATHINIDGADGSQTIEAKNTIIATGSKPGSLPFITLDKERVITSTEALTLKEIPKHMIVI
GGGVIGLELGQVYRRLGAEVTVIEYQDRITPVMDKMLSKELMKVLKKQKIKFHLSHAVNK
VERNGDEVTVTAKNKKGEEVTFTGDYCLVSVGRRPYTDKLNATAAGVKINERGQVETNEH
LQTNVSNIYAIGDVVKGAMLAHKAEEEGVFVAETIAGQKPHINYNLIPNVIYTWPEVASV
GKTEEELKEAGTAIKVGQFPMRALGRARASGDIDGMVKIIADEKTDEVLGVHMIGARVAD
LIAEAVTAMEFRASAEDIARMSHAHPTYAEAVKEAALAATADRAMHV
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgagtacatacgatgtagcaataataggatcaggacctggaggatatgtggcagcaata
cgttgcgcacaactaggtatgaaaactgcaattattgaaaaatataacacactaggagga
acctgccttaatgtaggttgtattccttcaaaagctttacttgactcatcgcaccactat
gatgatgcgatgaagcattttgaagaacatggaattgaaattccgggcgagatcaaaatc
aactttgagaaaatgattgctcgtaaaaagcaagtagtagatcaaacttgtgacggtgta
gcttttttaatgaagaaaaataacatcgatgtatatactgggatgggatcttttaaagat
gccactcacatcaacattgatggtgcagacggtagtcaaactattgaagcaaaaaatacc
attatcgctacaggttctaaaccaggtagcttaccatttataacgctagataaagaaaga
gtaatcacatctacagaagcacttactcttaaagaaatccctaaacatatgattgttata
ggtggtggagttataggactagaattaggacaggtatatcgcagactaggtgctgaagtt
accgtaattgaatatcaagatcgtattactcctgtaatggataaaatgctttccaaagag
ttgatgaaagtcctaaaaaagcaaaagataaaattccatttatctcacgctgtgaataaa
gtagagcgcaatggagatgaggtgaccgttactgcaaaaaataaaaaaggtgaagaagtt
acttttactggtgattactgtctagtatctgtaggtagaagaccttacacagataaatta
aatgctacagccgcaggagttaaaattaatgagcgtggacaggtagaaactaatgagcat
ttacaaactaatgtatccaacatttatgcaataggtgatgtggttaaaggagcaatgctt
gcccataaggccgaggaagaaggtgtttttgtagcagaaactatcgcaggtcaaaaacct
cacattaattataaccttatccctaatgtaatttacacatggccagaagtggcaagtgta
ggtaagactgaagaagaactgaaggaagcaggaactgctattaaagtaggtcaattccct
atgagagctttaggtagagctagagcaagtggtgacatagacggaatggttaaaatcatc
gcagatgagaagactgatgaagtactaggtgttcacatgataggagctcgtgttgcagac
ttaattgctgaggctgtgacggcaatggaattccgtgctagtgcagaggatattgcacgt
atgtctcatgcacaccctacatatgcagaagctgtaaaagaagcagcgctagcggctact
gcagatagagcaatgcacgtatag

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