Nonlabens ulvanivorans: R1T42_06195
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Entry
R1T42_06195 CDS
T09493
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nul
Nonlabens ulvanivorans
Pathway
nul03420
Nucleotide excision repair
nul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R1T42_06195
03430 Mismatch repair
R1T42_06195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nul03400
]
R1T42_06195
Enzymes [BR:
nul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R1T42_06195
DNA repair and recombination proteins [BR:
nul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R1T42_06195
MMR (mismatch excision repair)
Other MMR factors
R1T42_06195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
AAA_11
DEAD
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WOI24046
LinkDB
All DBs
Position
1364276..1366603
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AA seq
775 aa
AA seq
DB search
MQDYISQLNDAQREPVLQKDGAMIVIAGAGSGKTRVLTLRIAYLMQQGVDAFNILSLTFT
NKAAREMKKRIADIVGQSEAKNLWMGTFHSVFARLLRMEADKLGYPSNFTIYDSQDSQRL
VSAIIKEMGLDKDVYKYKQIASRISSMKNSLITVRAYFNDADLQEADAMARRPRFGDIYK
EYVERCFKAGAMDFDDLLLKTNELLNRFPEVLAKYQNRFQYILVDEYQDTNHSQYLIVKA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQRDYEGVKAYRLEQNYRSTKNIVEAANS
IIDKNKTKLDKVVWTANNDGPKIIVHRLMSDAEEGRYVAGSIFENKMQKQLGNDQFAILY
RTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEVKDVLAYLRVIVNPKDEESLKRIINYP
ARGIGATTMDKLIVAAKHYDRSIFEVIEHIDRIDIGIASSTKTKLKNFVMMIKSFQALEE
TQSVFELTEYVIKKSALINELKKDGSQEGISKVENIEELLNGMRDFVEGQKEVDEARGSL
AEFLEDVALATDLDNEKDTDDRVSLMTIHLAKGLEFPYVYIVGMEEDLFPSGMSMNTREE
LEEERRLFYVALTRAEHQAYLTYTLSRYRWGKLVDAEPSRFITEIDDQYLEYTTPMDDYR
YKSALTDHLWDEPDKSKLRQRKPVSGKPPSVSRPSEDQIRKLRKIRPSSSSNNSAPSGFE
GSLEPGMIVSHGRFGRGTVVNIEGAGGEKKAEINFQVGGIKKLLLRFAKLEVIDE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagattatatatctcaattaaatgacgcgcaacgtgaaccagtgttgcaaaaagat
ggtgccatgatcgttatagctggtgctggatctggtaagactcgagtactaactttgcgt
attgcatatttaatgcaacaaggtgtagatgcttttaatattctatcacttacgtttact
aacaaagctgctcgcgaaatgaaaaaacgtatcgcagacatcgttggtcaaagtgaagca
aagaatttatggatgggaaccttccactctgtttttgcaagactattgcgtatggaagca
gataaattaggctatccatcaaatttcactatttatgattctcaagactcgcaaagatta
gtgagcgctatcataaaagaaatgggactggataaagacgtctataaatacaagcaaatt
gcttctcgtatctcttccatgaagaatagccttattactgtgagagcttattttaatgat
gctgacttgcaagaggcagatgcgatggcgcgcagaccacgttttggagatatttataaa
gaatatgtagagcgttgtttcaaggcaggcgcaatggattttgatgatttattgttgaaa
acaaatgaactattaaatcgctttccagaagttctggcaaaatatcaaaatcgttttcaa
tacattctcgttgatgagtatcaggatacaaaccattcacaatacctcatcgtaaaagca
ttatctgataagtttcaaaatatatgtgtggtaggcgatgatgctcaatcgatttatgct
ttccgtggtgcgaatattaataatattttaaatttccaacgtgattatgaaggtgttaag
gcataccgactagaacaaaattatcgatctacaaaaaatattgtagaagcggcaaactct
atcatagataaaaataaaacgaaactggataaagtcgtatggacagcaaataatgatggt
cctaaaatcattgtacatcgtttgatgagcgatgcagaagaaggtcgatatgtagctggt
tctatatttgagaacaaaatgcaaaagcaactgggtaatgatcagtttgctattctttat
aggactaatgcgcaatctagagcgatggaagatgccttgcgtaagagagatatcccttat
agaatttatggaggattgagtttttaccaacgtaaagaggttaaggatgtattagcctat
ttaagagttatcgttaatcctaaagatgaagaatccttaaaacgtatcatcaattatcca
gcgcgtggtataggtgcgactactatggataaattgattgttgcagcaaagcattatgat
cgcagtatttttgaagttatagaacatatcgatcgcattgatataggtattgctagcagt
acaaaaacaaaacttaaaaactttgtcatgatgattaagagctttcaggctcttgaagaa
acacaatctgtttttgaacttacagaatatgtgataaagaaaagtgcattaattaatgag
cttaaaaaagatggtagtcaggaaggtatctctaaagttgagaatattgaagagctacta
aatggaatgcgagactttgttgaaggtcagaaagaagttgatgaagctagaggttctctt
gcagagtttctagaagatgtcgctctagcaactgatttagataatgaaaaagacaccgat
gatcgcgtttctttaatgactattcaccttgccaaaggattagagtttccatacgtatat
atcgtaggaatggaagaagatcttttccctagtggaatgagtatgaatactcgcgaggaa
ttagaagaggaacgacgcctattttatgtagcacttactagagcagagcatcaagcatat
cttacttataccttaagtagatatcgatggggaaaactagtcgatgcagaacctagccgt
tttattactgaaatcgatgaccagtatctagagtacacaactcctatggatgattatagg
tacaaaagcgccttaaccgatcatttatgggatgaaccagacaaatctaaattaagacag
cgtaaaccagtatctggtaagccacctagtgttagtagacctagtgaagatcagattaga
aaactgcgcaagataagacctagttcatctagtaataatagtgctccatcaggttttgaa
ggaagcttagagccaggaatgatcgtctcacatggacgcttcggccgaggaaccgttgta
aatatagaaggtgctggtggtgagaaaaaagcagaaattaactttcaagtcggtggaatt
aaaaaactattattacgatttgcaaaattggaggttattgacgaataa
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